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A genome-wide association study identifies a susceptibility locus for refractive errors and myopia at 15q14.

Solouki AM, Verhoeven VJ, van Duijn CM et al.

20835239 PubMed ID
GWAS Study Type
15608 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

SA
Solouki AM
VV
Verhoeven VJ
VD
van Duijn CM
VA
Verkerk AJ
IM
Ikram MK
HP
Hysi PG
DD
Despriet DD
VK
van Koolwijk LM
HL
Ho L
RW
Ramdas WD
CM
Czudowska M
KR
Kuijpers RW
AN
Amin N
SM
Struchalin M
AY
Aulchenko YS
VR
van Rij G
RF
Riemslag FC
YT
Young TL
MD
Mackey DA
ST
Spector TD
GT
Gorgels TG
WJ
Willemse-Assink JJ
IA
Isaacs A
KR
Kramer R
SS
Swagemakers SM
BA
Bergen AA
VO
van Oosterhout AA
OB
Oostra BA
RF
Rivadeneira F
UA
Uitterlinden AG
HA
Hofman A
DJ
de Jong PT
HC
Hammond CJ
VJ
Vingerling JR
KC
Klaver CC
Chapter II

Abstract

Summary of the research findings

Refractive errors are the most common ocular disorders worldwide and may lead to blindness. Although this trait is highly heritable, identification of susceptibility genes has been challenging. We conducted a genome-wide association study for refractive error in 5,328 individuals from a Dutch population-based study with replication in four independent cohorts (combined 10,280 individuals in the replication stage). We identified a significant association at chromosome 15q14 (rs634990, P = 2.21 × 10⁻¹⁴). The odds ratio of myopia compared to hyperopia for the minor allele (minor allele frequency = 0.47) was 1.41 (95% CI 1.16-1.70) for individuals heterozygous for the allele and 1.83 (95% CI 1.42-2.36) for individuals homozygous for the allele. The associated locus is near two genes that are expressed in the retina, GJD2 and ACTC1, and appears to harbor regulatory elements which may influence transcription of these genes. Our data suggest that common variants at 15q14 influence susceptibility for refractive errors in the general population.

5,328 European ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

15608
Total Participants
GWAS
Study Type
Yes
Replicated
10,280 European ancestry individuals
Replication Participants
European
Ancestry
Netherlands, U.K.
Recruitment Country
Chapter IV

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