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GWAS Study

Genetic variants in GPR126 are associated with adolescent idiopathic scoliosis.

Kou I, Takahashi Y, Johnson TA et al.

23666238 PubMed ID
GWAS Study Type
30894 Participants
162 Views
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

KI
Kou I
TY
Takahashi Y
JT
Johnson TA
TA
Takahashi A
GL
Guo L
DJ
Dai J
QX
Qiu X
SS
Sharma S
TA
Takimoto A
OY
Ogura Y
JH
Jiang H
YH
Yan H
KK
Kono K
KN
Kawakami N
UK
Uno K
IM
Ito M
MS
Minami S
YH
Yanagida H
TH
Taneichi H
HN
Hosono N
TT
Tsuji T
ST
Suzuki T
SH
Sudo H
KT
Kotani T
YI
Yonezawa I
LD
Londono D
GD
Gordon D
HJ
Herring JA
WK
Watanabe K
CK
Chiba K
KN
Kamatani N
JQ
Jiang Q
HY
Hiraki Y
KM
Kubo M
TY
Toyama Y
TT
Tsunoda T
WC
Wise CA
QY
Qiu Y
SC
Shukunami C
MM
Matsumoto M
IS
Ikegawa S
Chapter II

Abstract

Summary of the research findings

Adolescent idiopathic scoliosis (AIS) is the most common pediatric skeletal disease. We previously reported a locus on chromosome 10q24.31 associated with AIS susceptibility in Japanese using a genome-wide association study (GWAS) consisting of 1,033 cases and 1,473 controls. To identify additional AIS-associated loci, we expanded the study by adding X-chromosome SNPs in the GWAS and increasing the size of the replication cohorts. Through a stepwise association study including 1,819 cases and 25,939 controls, we identified a new susceptibility locus on chromosome 6q24.1 in Japanese (P = 2.25 × 10(-10); odds ratio (OR) = 1.28). The most significantly associated SNP, rs6570507, was in GPR126 (encoding G protein-coupled receptor 126). Its association was replicated in Han Chinese and European-ancestry populations (combined P = 1.27 × 10(-14); OR = 1.27). GPR126 was highly expressed in cartilage, and the knockdown of gpr126 in zebrafish caused delayed ossification of the developing spine. Our results should provide insights into the etiology and pathogenesis of AIS.

1,033 Japanese ancestry cases, 1,473 Japanese ancestry controls

Chapter III

Study Statistics

Key metrics and study information

30894
Total Participants
GWAS
Study Type
Yes
Replicated
1,529 East Asian ancestry cases, 25,675 East Asian ancestry controls, 447 European ancestry cases, 737 European ancestry controls
Replication Participants
East Asian, European
Ancestry
China, Japan, U.S.
Recruitment Country
Chapter IV

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