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GWAS Study

A genome-wide association study identifies six novel risk loci for primary biliary cholangitis.

Qiu F, Tang R, Zuo X et al.

28425483 PubMed ID
GWAS Study Type
8192 Participants
233 Views
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

QF
Qiu F
TR
Tang R
ZX
Zuo X
SX
Shi X
WY
Wei Y
ZX
Zheng X
DY
Dai Y
GY
Gong Y
WL
Wang L
XP
Xu P
ZX
Zhu X
WJ
Wu J
HC
Han C
GY
Gao Y
ZK
Zhang K
JY
Jiang Y
ZJ
Zhou J
SY
Shao Y
HZ
Hu Z
TY
Tian Y
ZH
Zhang H
DN
Dai N
LL
Liu L
WX
Wu X
ZW
Zhao W
ZX
Zhang X
ZZ
Zang Z
NJ
Nie J
SW
Sun W
ZY
Zhao Y
MY
Mao Y
JP
Jiang P
JH
Ji H
DQ
Dong Q
LJ
Li J
LZ
Li Z
BX
Bai X
LL
Li L
LM
Lin M
DM
Dong M
LJ
Li J
ZP
Zhu P
WC
Wang C
ZY
Zhang Y
JP
Jiang P
WY
Wang Y
JR
Jawed R
XJ
Xu J
ZY
Zhang Y
WQ
Wang Q
YY
Yang Y
YF
Yang F
LM
Lian M
JX
Jiang X
XX
Xiao X
LY
Li Y
FJ
Fang J
QD
Qiu D
ZZ
Zhu Z
QH
Qiu H
ZJ
Zhang J
TW
Tian W
CS
Chen S
JL
Jiang L
JB
Ji B
LP
Li P
CG
Chen G
WT
Wu T
SY
Sun Y
YJ
Yu J
TH
Tang H
HM
He M
XM
Xia M
PH
Pei H
HL
Huang L
QZ
Qing Z
WJ
Wu J
HQ
Huang Q
HJ
Han J
XW
Xie W
SZ
Sun Z
GJ
Guo J
HG
He G
EG
Eric Gershwin M
LZ
Lian Z
LX
Liu X
SM
Seldin MF
LX
Liu X
CW
Chen W
MX
Ma X
Chapter II

Abstract

Summary of the research findings

Primary biliary cholangitis (PBC) is an autoimmune liver disease with a strong hereditary component. Here, we report a genome-wide association study that included 1,122 PBC cases and 4,036 controls of Han Chinese descent, with subsequent replication in a separate cohort of 907 PBC cases and 2,127 controls. Our results show genome-wide association of 14 PBC risk loci including previously identified 6p21 (HLA-DRA and DPB1), 17q12 (ORMDL3), 3q13.33 (CD80), 2q32.3 (STAT1/STAT4), 3q25.33 (IL12A), 4q24 (NF-κB) and 22q13.1 (RPL3/SYNGR1). We also identified variants in IL21, IL21R, CD28/CTLA4/ICOS, CD58, ARID3A and IL16 as novel PBC risk loci. These new findings and histochemical studies showing enhanced expression of IL21 and IL21R in PBC livers (particularly in the hepatic portal tracks) support a disease mechanism in which the deregulation of the IL21 signalling pathway, in addition to CD4 T-cell activation and T-cell co-stimulation are critical components in the development of PBC.

1,122 Han Chinese ancestry cases, 4,036 Han Chinese ancestry controls

Chapter III

Study Statistics

Key metrics and study information

8192
Total Participants
GWAS
Study Type
Yes
Replicated
907 Han Chinese ancestry cases, 2,127 Han Chinese ancestry controls
Replication Participants
East Asian
Ancestry
China
Recruitment Country
Chapter IV

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