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GWAS Study

Identification of genetic effects underlying type 2 diabetes in South Asian and European populations.

Loh M, Zhang W, Ng HK et al.

35393509 PubMed ID
GWAS Study Type
50533 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

LM
Loh M
ZW
Zhang W
NH
Ng HK
SK
Schmid K
LA
Lamri A
TL
Tong L
AM
Ahmad M
LJ
Lee JJ
NM
Ng MCY
PL
Petty LE
SC
Spracklen CN
TF
Takeuchi F
IM
Islam MT
JF
Jasmine F
KA
Kasturiratne A
KM
Kibriya M
MK
Mohlke KL
PG
Paré G
PG
Prasad G
SM
Shahriar M
CM
Chee ML
DS
de Silva HJ
EJ
Engert JC
GH
Gerstein HC
MK
Mani KR
SC
Sabanayagam C
VM
Vujkovic M
WA
Wickremasinghe AR
WT
Wong TY
YC
Yajnik CS
YS
Yusuf S
AH
Ahsan H
BD
Bharadwaj D
AS
Anand SS
BJ
Below JE
BM
Boehnke M
BD
Bowden DW
CG
Chandak GR
CC
Cheng CY
KN
Kato N
MA
Mahajan A
SX
Sim X
MM
McCarthy MI
MA
Morris AP
KJ
Kooner JS
SD
Saleheen D
CJ
Chambers JC
Chapter II

Abstract

Summary of the research findings

South Asians are at high risk of developing type 2 diabetes (T2D). We carried out a genome-wide association meta-analysis with South Asian T2D cases (n = 16,677) and controls (n = 33,856), followed by combined analyses with Europeans (neff = 231,420). We identify 21 novel genetic loci for significant association with T2D (P = 4.7 × 10-8 to 5.2 × 10-12), to the best of our knowledge at the point of analysis. The loci are enriched for regulatory features, including DNA methylation and gene expression in relevant tissues, and highlight CHMP4B, PDHB, LRIG1 and other genes linked to adiposity and glucose metabolism. A polygenic risk score based on South Asian-derived summary statistics shows ~4-fold higher risk for T2D between the top and bottom quartile. Our results provide further insights into the genetic mechanisms underlying T2D, and highlight the opportunities for discovery from joint analysis of data from across ancestral populations.

16,677 South Asian ancestry cases, 33,856 South Asian ancestry controls

Chapter III

Study Statistics

Key metrics and study information

50533
Total Participants
GWAS
Study Type
Yes
Replicated
231,420 European ancestry individuals
Replication Participants
South Asian, European
Ancestry
Qatar, South Africa, Bermuda, U.K., Australia, Germany, Singapore, Sri Lanka, Malaysia, Bahrain, India, Canada, Bangladesh, Netherlands, Pakistan, U.S.
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

Important Disclaimer: This review has been performed semi-automatically and is provided for informational purposes only. While we strive for accuracy, this analysis may contain errors, omissions, or misinterpretations of the original research. DNA Genics disclaims all liability for any inaccuracies, errors, or consequences arising from the use of this information. Users should independently verify all information and consult original research publications before making any decisions based on this content. This analysis is not intended as a substitute for professional scientific review or medical advice.

Analysis In Progress

Our analysis of this publication is currently being prepared. Please check back soon for comprehensive insights into the health and genetic findings discussed in this research.