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GWAS Study

Two novel genetic variants in the STK38L and RAB27A genes are associated with glioma susceptibility.

Chen H, Chen G, Li G et al.

30714141 PubMed ID
GWAS Study Type
7479 Participants
81 Views
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

CH
Chen H
CG
Chen G
LG
Li G
ZS
Zhang S
CH
Chen H
CY
Chen Y
DD
Duggan D
HZ
Hu Z
CJ
Chen J
ZY
Zhao Y
ZY
Zhao Y
HH
Huang H
ZS
Zheng SL
TJ
Trent JM
YL
Yu L
JD
Jiang D
MZ
Mo Z
WH
Wang H
MY
Mou Y
JT
Jiang T
MY
Mao Y
XJ
Xu J
LD
Lu D
Chapter II

Abstract

Summary of the research findings

Glioma is the most common malignant primary brain tumors with poor prognosis. Genome wide association studies (GWAS) of glioma in populations with Western European ancestry were completed in the US and UK. However, our previous results strongly suggest the genetic heterogeneity could be important in glioma risk. To systematically investigate glioma risk-associated variants in Chinese population, we performed a multistage GWAS of glioma in the Han Chinese population, with a total of 3,097 glioma cases and 4,362 controls. In addition to confirming two associations reported in other ancestry groups, this study identified one new risk-associated locus for glioma on chromosome 12p11.23 (rs10842893, pmeta = 2.33x10-12, STK38L) as well as a promising association at 15q15-21.1 (rs4774756, pmeta = 6.12x10-8, RAB27A) in 3,097 glioma cases and 4,362 controls. Our findings demonstrate two novel association between the glioma risk region marked by variant rs10842893 and rs4774756) and glioma risk. These findings may advance the understanding of genetic susceptibility to glioma.

992 Han Chinese ancestry cases, 1,008 Han Chinese ancestry controls

Chapter III

Study Statistics

Key metrics and study information

7479
Total Participants
GWAS
Study Type
Yes
Replicated
2,105 Han Chinese ancestry cases, 3,374 Han Chinese ancestry controls
Replication Participants
East Asian
Ancestry
China
Recruitment Country
Chapter IV

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