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mtDNA Haplogroup • Maternal Lineage

F3B1

mtDNA Haplogroup F3B1

~6,000 years ago
Southern China / Southeast Asia
1 subclades
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Chapter I

The Story

The journey of mtDNA haplogroup F3B1

Origins and Evolution

mtDNA haplogroup F3B1 is a downstream subclade of the F3 branch within haplogroup F, a maternal lineage that arose in East–Southeast Asia. Based on the topology of the F phylogeny and coalescence times estimated for neighboring F3 subclades, F3B1 most likely arose in the early to mid-Holocene (several thousand years ago), plausibly linked to demographic expansions associated with Neolithic subsistence changes (for example, the spread of rice agriculture across southern China into mainland Southeast Asia). Exact age estimates are currently provisional because F3B1 is rare in published datasets and requires additional complete-mitochondrial genomes for precise molecular dating.

Subclades

As an intermediate clade identified in Phylotree-style references, F3B1 may have further downstream branches identified in future high-resolution sequencing work. At present it is treated as a distinct tip or short internal branch connecting its parent clade (F3BA) to any as-yet-undescribed child lineages. Because sampling of F3 substructure remains incomplete, additional subclades could be discovered in under-sampled populations of southern China and Southeast Asia.

Geographical Distribution

The distribution of F3 and its subclades is concentrated in southern China and mainland and island Southeast Asia. By phylogeographic inference and limited reported occurrences of related F3 lineages, F3B1 is most likely found at low to moderate frequency in: southern Han communities, Tai-Kadai and Hmong-Mien speaking groups of southern China and northern mainland Southeast Asia (e.g., Zhuang, Dai), Austroasiatic groups (e.g., Vietnamese, Khmer), and among some Austronesian-speaking populations in Island Southeast Asia and Taiwan. Its rarity in published datasets means reported occurrences are sporadic and regional, and a broader geographic footprint may be revealed as more complete mtDNA genomes are published.

Historical and Cultural Significance

While there is currently no direct archaeological signature that maps uniquely to F3B1, its inferred time depth and location are consistent with genetic signals tied to Neolithic transformations in East and Southeast Asia — particularly the spread of wet-rice agriculture and attendant demographic growth. The lineage may therefore have participated in the genetic substrate of populations involved in the Austronesian expansion and other Holocene population rearrangements in the region, although this association is provisional and should be tested with ancient DNA sampling.

Conclusion

F3B1 represents a fine-scale maternal lineage within the broader East–Southeast Asian mtDNA landscape. Current knowledge is limited: the haplogroup is best characterized as a Holocene-age subclade likely rooted in southern China or mainland Southeast Asia, and it awaits fuller characterization through broader population sampling and full mitochondrial sequencing. Future targeted studies — including ancient DNA from Neolithic and later archaeological contexts in the region — will be necessary to refine its age, distribution, and historical role.

Key Points

  • Origins and Evolution
  • Subclades
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 F3B1 Current ~6,000 years ago 🪨 Chalcolithic 6,000 years 1 4 0
2 F3BA — — — 1 4 0
3 F3B ~8,000 years ago 🌾 Neolithic 8,000 years 1 4 2
4 F3 ~15,000 years ago 🏹 Mesolithic 15,000 years 2 13 5
5 F ~28,000 years ago 🦴 Paleolithic 28,000 years 4 210 6
6 R9 ~40,000 years ago 🦴 Paleolithic 40,000 years 3 225 0
7 R ~55,000 years ago 🦴 Paleolithic 55,000 years 17 17,854 57
8 NA — — — 1 17,854 0
9 N ~60,000 years ago 🦴 Paleolithic 60,000 years 16 20,371 13
10 L3 ~70,000 years ago 🦴 Paleolithic 70,000 years 7 23,542 6
11 L3'4 — — — 2 23,581 0
12 L3'4'6 — — — 2 23,584 0
13 L2'3'4'6 — — — 2 24,475 0
14 L2'3'4'5'6'7 — — — 2 24,488 0
15 L1'2'3'4'5'6'7 — — — 2 24,903 0
16 L ~160,000 years ago 🦴 Paleolithic 160,000 years 2 25,205 5
Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

Southern China / Southeast Asia

Modern Distribution

The populations where mtDNA haplogroup F3B1 is found include:

  1. Southern Han Chinese (southern provinces such as Guangxi, Guangdong, Yunnan)
  2. Tai-Kadai speaking groups (e.g., Zhuang, Dai)
  3. Austroasiatic populations (e.g., Vietnamese, Khmer, Mon)
  4. Selected Austronesian-speaking groups in Island Southeast Asia and Taiwan
  5. Smaller, localized indigenous groups of mainland Southeast Asia (reported at low frequency)
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~6k years ago

Haplogroup F3B1

Your mtDNA haplogroup emerged in Southern China / Southeast Asia

Southern China / Southeast Asia
~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup F3B1

Cultural Heritage

These ancient cultures have been linked to haplogroup F3B1 based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Early Kazakh Iron Historical Malaysian Huatuyan Culture Late Medieval Mongolian Roman Republic Taiwanese Iron Yellow River Culture
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

2 direct carriers and 7 subclade carriers of haplogroup F3B1

9 / 9 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual I3731 from Taiwan, dated 1 CE - 800 CE
I3731
Taiwan Iron Age Taiwan 1 CE - 800 CE Taiwanese Iron F3b1 Direct
Portrait of ancient individual I8079 from Taiwan, dated 1 CE - 800 CE
I8079
Taiwan Iron Age Taiwan 1 CE - 800 CE Taiwanese Iron F3b1 Direct
Portrait of ancient individual I8074 from Taiwan, dated 1 CE - 800 CE
I8074
Taiwan Iron Age Taiwan 1 CE - 800 CE Taiwanese Iron F3b1a-a Downstream
Portrait of ancient individual I8080 from Taiwan, dated 1 CE - 800 CE
I8080
Taiwan Iron Age Taiwan 1 CE - 800 CE Taiwanese Iron F3b1a-a Downstream
Portrait of ancient individual I14933 from Taiwan, dated 1 CE - 800 CE
I14933
Taiwan Iron Age Taiwan 1 CE - 800 CE Taiwanese Iron F3b1a Downstream
Portrait of ancient individual I3728 from Taiwan, dated 401 CE - 538 CE
I3728
Taiwan Iron Age Taiwan 401 CE - 538 CE Taiwanese Iron F3b1a-a Downstream
Portrait of ancient individual I3619 from Taiwan, dated 415 CE - 540 CE
I3619
Taiwan Iron Age Taiwan 415 CE - 540 CE Taiwanese Iron F3b1a-a Downstream
Portrait of ancient individual I8081 from Taiwan, dated 439 CE - 586 CE
I8081
Taiwan Iron Age Taiwan 439 CE - 586 CE Taiwanese Iron F3b1a2 Downstream
Portrait of ancient individual Ma554 from Malaysia, dated 1448 CE - 1625 CE
Ma554
Malaysia Historical Malaysia 1448 CE - 1625 CE Historical Malaysian F3b1a-a Downstream
Chapter VI

Carrier Distribution Map

Geographic distribution of 9 ancient DNA samples (direct and subclade carriers of F3B1)

Direct carrier Subclade carrier
Time Period Filter
All Time Periods
Showing all samples
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution by country of origin (direct and subclade carriers shown by default)

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods (direct and subclade carriers shown by default)

Data

Data & Provenance

Source information and data quality

Last Updated 2026-06-14
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.