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Y-DNA Haplogroup • Paternal Lineage

C2A1A3A6

Y-DNA Haplogroup C2A1A3A6

~1,000 years ago
Northeast Asia / South Siberia
1 subclades
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Chapter I

The Story

The journey of Y-DNA haplogroup C2A1A3A6

Origins and Evolution

Y‑DNA haplogroup C2A1A3A6 is a downstream branch of the broader C2A1A3A clade that sits within the East Eurasian C2 (formerly C3) macrolineage. Based on its phylogenetic position and the demographic history of closely related subclades, C2A1A3A6 most likely differentiated on the forest‑steppe margins of Northeast Asia / southern Siberia in the last ~1,000–2,000 years (early first millennium CE to the medieval period). Its emergence is consistent with relatively recent, male‑biased expansions of pastoralist and nomadic groups in that region.

The clade is defined by one or more derived SNPs nested beneath the defining mutations of C2A1A3A; high‑resolution SNP testing is required to distinguish it from sibling subclades. Because this is a relatively deep terminal branch within a region of dynamic population movement, the lineage shows a patchy but regionally concentrated pattern today.

Subclades (if applicable)

C2A1A3A6 is a terminal or near‑terminal subclade in many published trees and may contain further low‑frequency downstream substructure that has not been widely sampled. Where additional downstream SNPs have been identified, they tend to define geographically localized lineages (micro‑subclades) within Mongolia, Buryatia and adjacent Siberian republics. Many of these finer branches are known from limited modern testing and from a small number of archaeogenetic samples, so nomenclature and internal branching remain subject to revision as more high‑coverage Y‑SNP sequencing becomes available.

Geographical Distribution

The modern distribution of C2A1A3A6 is concentrated in northeastern Asia and southern Siberia, with the highest frequencies observed among Mongolic‑speaking and some Tungusic‑speaking populations. It is present at lower frequencies across parts of Central Asia (e.g., among certain Kazakh and Kyrgyz subgroups) and occurs sporadically in northern Han Chinese and Korean populations. The patchy distribution reflects recent population movements and founder effects tied to nomadic and pastoralist social structures, where male lineages can expand rapidly in localized contexts.

Archaeogenetic evidence tying C2A1A3A6 specifically to archaeological contexts remains limited but consistent with identification of related C2A1A3A lineages in Iron Age and medieval nomadic burials across Mongolia and southern Siberia. These contexts suggest continuity between prehistoric and historic-era nomadic male lineages in the region.

Historical and Cultural Significance

Because C2A1A3A and its downstream branches have been repeatedly observed among Mongolic and Tungusic groups, C2A1A3A6 is best interpreted as one of several male lineages that contributed to the genetic makeup of medieval nomadic and pastoralist societies of northeastern Eurasia. Large‑scale social phenomena — such as formation of tribal confederations, successes of warrior elites, and male‑line founder events during expansions (including those associated with the Mongol period) — can produce localized high frequencies of particular Y‑lineages.

Caution is warranted: presence of C2A1A3A6 in an individual does not by itself indicate elite ancestry or direct descent from any single historical group. Instead, it indicates paternal ancestry tracing to populations of northeastern Asian forest‑steppe and is useful in conjunction with autosomal, archaeological and historical data for reconstructing past migrations and social structure.

Conclusion

C2A1A3A6 is a recently derived, regionally concentrated Y‑chromosome lineage most characteristic of Mongolic and Tungusic‑associated populations of Northeast Asia and southern Siberia. It exemplifies how relatively young paternal lineages can become regionally important through demographic processes tied to nomadism and pastoralism. Continued high‑resolution SNP discovery and expanded sampling in underrepresented northern Asian populations and ancient remains will clarify the internal structure, age, and precise migration history of this clade.

Key Points

  • Origins and Evolution
  • Subclades (if applicable)
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 C2A1A3A6 Current ~1,000 years ago 🏰 Medieval 1,000 years 1 0 0

Siblings (1)

Other branches from the same parent haplogroup

Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

Northeast Asia / South Siberia

Modern Distribution

The populations where Y-DNA haplogroup C2A1A3A6 is found include:

  1. Mongolic-speaking groups (e.g., Mongols, Buryats)
  2. Tungusic peoples (e.g., Evenks, Evens, some Manchu-associated groups)
  3. Southern Siberian indigenous populations (Altai, Tuva, Khakassia)
  4. Selected Central Asian Turkic groups at low-to-moderate frequency (e.g., some Kazakh and Kyrgyz subgroups)
  5. Northern Han Chinese and Korean populations at low frequency
  6. Medieval and Iron Age nomadic archaeological contexts in Mongolia and southern Siberia (inferred/observed in related C2A1A material)

Regional Presence

Northeast Asia High
Southern Siberia High
Central Asia Moderate
East Asia (Northern China, Korea) Low
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

~1k years ago

Haplogroup C2A1A3A6

Your Y-DNA haplogroup emerged in Northeast Asia / South Siberia

Northeast Asia / South Siberia
Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with Y-DNA haplogroup C2A1A3A6

Cultural Heritage

These ancient cultures have been linked to haplogroup C2A1A3A6 based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Altai-Sayan Boisman Center West 4 Late Medieval Mongolian Medieval Khuvsgul Mongol Northern West Siberian Culture Ob River Culture Sukhbaatar Culture Umungobi Medieval
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Data

Data & Provenance

Source information and data quality

Last Updated 2026-02-16
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for YDNA haplogroup classification and data.