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GWAS Study

Genetic variants on chromosome 1q41 influence ocular axial length and high myopia.

Fan Q, Barathi VA, Cheng CY et al.

22685421 PubMed ID
GWAS Study Type
4944 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

FQ
Fan Q
BV
Barathi VA
CC
Cheng CY
ZX
Zhou X
MA
Meguro A
NI
Nakata I
KC
Khor CC
GL
Goh LK
LY
Li YJ
LW
Lim W
HC
Ho CE
HF
Hawthorne F
ZY
Zheng Y
CD
Chua D
IH
Inoko H
YK
Yamashiro K
OK
Ohno-Matsui K
MK
Matsuo K
MF
Matsuda F
VE
Vithana E
SM
Seielstad M
MN
Mizuki N
BR
Beuerman RW
TE
Tai ES
YN
Yoshimura N
AT
Aung T
YT
Young TL
WT
Wong TY
TY
Teo YY
SS
Saw SM
Chapter II

Abstract

Summary of the research findings

As one of the leading causes of visual impairment and blindness, myopia poses a significant public health burden in Asia. The primary determinant of myopia is an elongated ocular axial length (AL). Here we report a meta-analysis of three genome-wide association studies on AL conducted in 1,860 Chinese adults, 929 Chinese children, and 2,155 Malay adults. We identified a genetic locus on chromosome 1q41 harboring the zinc-finger 11B pseudogene ZC3H11B showing genome-wide significant association with AL variation (rs4373767, β = -0.16 mm per minor allele, P(meta) =2.69 × 10(-10)). The minor C allele of rs4373767 was also observed to significantly associate with decreased susceptibility to high myopia (per-allele odds ratio (OR) =0.75, 95% CI: 0.68-0.84, P(meta) =4.38 × 10(-7)) in 1,118 highly myopic cases and 5,433 controls. ZC3H11B and two neighboring genes SLC30A10 and LYPLAL1 were expressed in the human neural retina, retinal pigment epithelium, and sclera. In an experimental myopia mouse model, we observed significant alterations to gene and protein expression in the retina and sclera of the unilateral induced myopic eyes for the murine genes ZC3H11A, SLC30A10, and LYPLAL1. This supports the likely role of genetic variants at chromosome 1q41 in influencing AL variation and high myopia.

2,789 Chinese ancestry individuals, 2,155 Malay ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

4944
Total Participants
GWAS
Study Type
No
Replicated
South East Asian, East Asian
Ancestry
Singapore
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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Analysis In Progress

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