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GWAS Study

Genome-wide association study implicates a novel RNA gene, the lincRNA AC068718.1, as a risk factor for post-traumatic stress disorder in women.

Guffanti G, Galea S, Yan L et al.

24080187 PubMed ID
GWAS Study Type
2953 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

GG
Guffanti G
GS
Galea S
YL
Yan L
RA
Roberts AL
SN
Solovieff N
AA
Aiello AE
SJ
Smoller JW
DV
De Vivo I
RH
Ranu H
UM
Uddin M
WD
Wildman DE
PS
Purcell S
KK
Koenen KC
Chapter II

Abstract

Summary of the research findings

Posttraumatic stress disorder (PTSD) is a common and debilitating mental disorder with a particularly high burden for women. Emerging evidence suggests PTSD may be more heritable among women and evidence from animal models and human correlational studies suggest connections between sex-linked biology and PTSD vulnerability, which may extend to the disorder's genetic architecture. We conducted a genome-wide association study (GWAS) of PTSD in a primarily African American sample of women from the Detroit Neighborhood Health Study (DNHS) and tested for replication in an independent cohort of primarily European American women from the Nurses Health Study II (NHSII). We genotyped 413 DNHS women - 94 PTSD cases and 319 controls exposed to at least one traumatic event - on the Illumina HumanOmniExpress BeadChip for >700,000 markers and tested 578 PTSD cases and 1963 controls from NHSII for replication. We performed a network-based analysis integrating data from GWAS-derived independent regions of association and the Reactome database of functional interactions. We found genome-wide significant association for one marker mapping to a novel RNA gene, lincRNA AC068718.1, for which we found suggestive evidence of replication in NHSII. Our network-based analysis indicates that our top GWAS results were enriched for pathways related to telomere maintenance and immune function. Our findings implicate a novel RNA gene, lincRNA AC068718.1, as risk factor for PTSD in women and add to emerging evidence that non-coding RNA genes may play a crucial role in shaping the landscape of gene regulation with putative pathological effects that lead to phenotypic differences.

81 African American female cases, 261 African American female controls, 10 European ancestry female cases, 35 European ancestry female controls, 3 female cases, 22 female controls

Chapter III

Study Statistics

Key metrics and study information

2953
Total Participants
GWAS
Study Type
Yes
Replicated
578 European ancestry female cases, 1,963 European ancestry female controls
Replication Participants
Other, European, African American or Afro-Caribbean
Ancestry
U.S.
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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Analysis In Progress

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