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GWAS Study

New loci associated with chronic hepatitis B virus infection in Han Chinese.

Hu Z, Liu Y, Zhai X et al.

24162738 PubMed ID
GWAS Study Type
11791 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

HZ
Hu Z
LY
Liu Y
ZX
Zhai X
DJ
Dai J
JG
Jin G
WL
Wang L
ZL
Zhu L
YY
Yang Y
LJ
Liu J
CM
Chu M
WJ
Wen J
XK
Xie K
DG
Du G
WQ
Wang Q
ZY
Zhou Y
CM
Cao M
LL
Liu L
HY
He Y
WY
Wang Y
ZG
Zhou G
JW
Jia W
LJ
Lu J
LS
Li S
LJ
Liu J
YH
Yang H
SY
Shi Y
ZW
Zhou W
SH
Shen H
Chapter II

Abstract

Summary of the research findings

Chronic hepatitis B virus (HBV) infection is a challenging global health problem. To identify genetic loci involved in chronic HBV infection, we designed a three-phase genome-wide association study in Han Chinese populations. The discovery phase included 951 HBV carriers (cases) and 937 individuals who had naturally cleared HBV infection (controls) and was followed by independent replications with a total of 2,248 cases and 3,051 controls and additional replications with 1,982 HBV carriers and 2,622 controls from the general population. We identified two new loci associated with chronic HBV infection: rs3130542 at 6p21.33 (near HLA-C, odds ratio (OR) = 1.33, P = 9.49 × 10(-14)) and rs4821116 at 22q11.21 (in UBE2L3, OR = 0.82, P = 1.71 × 10(-12)). Additionally, we replicated the previously identified associations of HLA-DP and HLA-DQ variants at 6p21.32 with chronic HBV infection. These findings highlight the importance of HLA-C and UBE2L3 in the clearance of HBV infection in addition to HLA-DP and HLA-DQ.

951 Han Chinese ancestry HBV carrier cases, 937 Han Chinese ancestry HBV cleared controls

Chapter III

Study Statistics

Key metrics and study information

11791
Total Participants
GWAS
Study Type
Yes
Replicated
4,230 Chinese ancestry HBV carrier cases, 3,051 Chinese ancestry HBV cleared controls, 2,622 Chinese ancestry controls
Replication Participants
East Asian
Ancestry
China
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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Analysis In Progress

Our analysis of this publication is currently being prepared. Please check back soon for comprehensive insights into the health and genetic findings discussed in this research.