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GWAS Study

Genome-wide association study of acute kidney injury after coronary bypass graft surgery identifies susceptibility loci.

Stafford-Smith M, Li YJ, Mathew JP et al.

26083657 PubMed ID
GWAS Study Type
1253 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

SM
Stafford-Smith M
LY
Li YJ
MJ
Mathew JP
LY
Li YW
JY
Ji Y
PB
Phillips-Bute BG
MC
Milano CA
NM
Newman MF
KW
Kraus WE
KM
Kertai MD
SS
Shah SH
PM
Podgoreanu MV
Chapter II

Abstract

Summary of the research findings

Acute kidney injury (AKI) is a common, serious complication of cardiac surgery. Since prior studies have supported a genetic basis for postoperative AKI, we conducted a genome-wide association study (GWAS) for AKI following coronary bypass graft (CABG) surgery. The discovery data set consisted of 873 nonemergent CABG surgery patients with cardiopulmonary bypass (PEGASUS), while a replication data set had 380 cardiac surgical patients (CATHGEN). Single-nucleotide polymorphism (SNP) data were based on Illumina Human610-Quad (PEGASUS) and OMNI1-Quad (CATHGEN) BeadChips. We used linear regression with adjustment for a clinical AKI risk score to test SNP associations with the postoperative peak rise relative to preoperative serum creatinine concentration as a quantitative AKI trait. Nine SNPs meeting significance in the discovery set were detected. The rs13317787 in GRM7|LMCD1-AS1 intergenic region (3p21.6) and rs10262995 in BBS9 (7p14.3) were replicated with significance in the CATHGEN data set and exhibited significantly strong overall association following meta-analysis. Additional fine mapping using imputed SNPs across these two regions and meta-analysis found genome-wide significance at the GRM7|LMCD1-AS1 locus and a significantly strong association at BBS9. Thus, through an unbiased GWAS approach, we found two new loci associated with post-CABG AKI providing new insights into the pathogenesis of perioperative AKI.

873 European ancestry cases

Chapter III

Study Statistics

Key metrics and study information

1253
Total Participants
GWAS
Study Type
Yes
Replicated
380 European ancestry cases
Replication Participants
European
Ancestry
U.S.
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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