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Genome-wide Trans-ethnic Meta-analysis Identifies Seven Genetic Loci Influencing Erythrocyte Traits and a Role for RBPMS in Erythropoiesis.

van Rooij FJA, Qayyum R, Smith AV et al.

28017375 PubMed ID
GWAS Study Type
67259 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

VR
van Rooij FJA
QR
Qayyum R
SA
Smith AV
ZY
Zhou Y
TS
Trompet S
TT
Tanaka T
KM
Keller MF
CL
Chang LC
SH
Schmidt H
YM
Yang ML
CM
Chen MH
HJ
Hayes J
JA
Johnson AD
YL
Yanek LR
MC
Mueller C
LL
Lange L
FJ
Floyd JS
GM
Ghanbari M
ZA
Zonderman AB
JJ
Jukema JW
HA
Hofman A
VD
van Duijn CM
DK
Desch KC
SY
Saba Y
OA
Ozel AB
SB
Snively BM
WJ
Wu JY
SR
Schmidt R
FM
Fornage M
KR
Klein RJ
FC
Fox CS
MK
Matsuda K
KN
Kamatani N
WP
Wild PS
SD
Stott DJ
FI
Ford I
SP
Slagboom PE
YJ
Yang J
CA
Chu AY
LA
Lambert AJ
UA
Uitterlinden AG
FO
Franco OH
HE
Hofer E
GD
Ginsburg D
HB
Hu B
KB
Keating B
SU
Schick UM
BJ
Brody JA
LJ
Li JZ
CZ
Chen Z
ZT
Zeller T
GJ
Guralnik JM
CD
Chasman DI
PL
Peters LL
KM
Kubo M
BD
Becker DM
LJ
Li J
EG
Eiriksdottir G
RJ
Rotter JI
LD
Levy D
GV
Grossmann V
PK
Patel KV
CC
Chen CH
RP
Ridker PM
TH
Tang H
LL
Launer LJ
RK
Rice KM
LR
Li-Gao R
FL
Ferrucci L
EM
Evans MK
CA
Choudhuri A
TE
Trompouki E
AB
Abraham BJ
YS
Yang S
TA
Takahashi A
KY
Kamatani Y
KC
Kooperberg C
HT
Harris TB
JS
Jee SH
CJ
Coresh J
TF
Tsai FJ
LD
Longo DL
CY
Chen YT
FJ
Felix JF
YQ
Yang Q
PB
Psaty BM
BE
Boerwinkle E
BL
Becker LC
MD
Mook-Kanamori DO
WJ
Wilson JG
GV
Gudnason V
OC
O'Donnell CJ
DA
Dehghan A
CL
Cupples LA
NM
Nalls MA
MA
Morris AP
OY
Okada Y
RA
Reiner AP
ZL
Zon LI
GS
Ganesh SK
Chapter II

Abstract

Summary of the research findings

Genome-wide association studies (GWASs) have identified loci for erythrocyte traits in primarily European ancestry populations. We conducted GWAS meta-analyses of six erythrocyte traits in 71,638 individuals from European, East Asian, and African ancestries using a Bayesian approach to account for heterogeneity in allelic effects and variation in the structure of linkage disequilibrium between ethnicities. We identified seven loci for erythrocyte traits including a locus (RBPMS/GTF2E2) associated with mean corpuscular hemoglobin and mean corpuscular volume. Statistical fine-mapping at this locus pointed to RBPMS at this locus and excluded nearby GTF2E2. Using zebrafish morpholino to evaluate loss of function, we observed a strong in vivo erythropoietic effect for RBPMS but not for GTF2E2, supporting the statistical fine-mapping at this locus and demonstrating that RBPMS is a regulator of erythropoiesis. Our findings show the utility of trans-ethnic GWASs for discovery and characterization of genetic loci influencing hematologic traits.

up to 29,946 European ancestry individuals, up to 6150 African American individuals, 15,074 East Asian individuals.

Chapter III

Study Statistics

Key metrics and study information

67259
Total Participants
GWAS
Study Type
Yes
Replicated
16,389 individuals of European and African American ancestry.
Replication Participants
East Asian, African American or Afro-Caribbean, European, European, African American or Afro-Caribbean
Ancestry
Chapter IV

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