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Genome-wide Study of Atrial Fibrillation Identifies Seven Risk Loci and Highlights Biological Pathways and Regulatory Elements Involved in Cardiac Development.

Nielsen JB, Fritsche LG, Zhou W et al.

29290336 PubMed ID
GWAS Study Type
377518 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

NJ
Nielsen JB
FL
Fritsche LG
ZW
Zhou W
TT
Teslovich TM
HO
Holmen OL
GS
Gustafsson S
GM
Gabrielsen ME
SE
Schmidt EM
BR
Beaumont R
WB
Wolford BN
LM
Lin M
BC
Brummett CM
PM
Preuss MH
RL
Refsgaard L
BE
Bottinger EP
GS
Graham SE
SI
Surakka I
CY
Chu Y
SA
Skogholt AH
DH
Dalen H
BA
Boyle AP
OH
Oral H
HT
Herron TJ
KJ
Kitzman J
JJ
Jalife J
SJ
Svendsen JH
OM
Olesen MS
NI
Njølstad I
LM
Løchen ML
BA
Baras A
GO
Gottesman O
MA
Marcketta A
OC
O'Dushlaine C
RM
Ritchie MD
WT
Wilsgaard T
LR
Loos RJF
FT
Frayling TM
BM
Boehnke M
IE
Ingelsson E
CD
Carey DJ
DF
Dewey FE
KH
Kang HM
AG
Abecasis GR
HK
Hveem K
WC
Willer CJ
Chapter II

Abstract

Summary of the research findings

Atrial fibrillation (AF) is a common cardiac arrhythmia and a major risk factor for stroke, heart failure, and premature death. The pathogenesis of AF remains poorly understood, which contributes to the current lack of highly effective treatments. To understand the genetic variation and biology underlying AF, we undertook a genome-wide association study (GWAS) of 6,337 AF individuals and 61,607 AF-free individuals from Norway, including replication in an additional 30,679 AF individuals and 278,895 AF-free individuals. Through genotyping and dense imputation mapping from whole-genome sequencing, we tested almost nine million genetic variants across the genome and identified seven risk loci, including two novel loci. One novel locus (lead single-nucleotide variant [SNV] rs12614435; p = 6.76 × 10-18) comprised intronic and several highly correlated missense variants situated in the I-, A-, and M-bands of titin, which is the largest protein in humans and responsible for the passive elasticity of heart and skeletal muscle. The other novel locus (lead SNV rs56202902; p = 1.54 × 10-11) covered a large, gene-dense chromosome 1 region that has previously been linked to cardiac conduction. Pathway and functional enrichment analyses suggested that many AF-associated genetic variants act through a mechanism of impaired muscle cell differentiation and tissue formation during fetal heart development.

6,337 European ancestry cases, 61,607 European ancestry controls

Chapter III

Study Statistics

Key metrics and study information

377518
Total Participants
GWAS
Study Type
Yes
Replicated
30,679 European ancestry cases, 278,895 European ancestry controls
Replication Participants
European
Ancestry
U.S., Denmark, Norway, U.K.
Recruitment Country
Chapter IV

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