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GWAS Study

Genome-wide association analysis of 95 549 individuals identifies novel loci and genes influencing optic disc morphology.

Han X, Qassim A, An J et al.

31809533 PubMed ID
GWAS Study Type
95549 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

HX
Han X
QA
Qassim A
AJ
An J
MH
Marshall H
ZT
Zhou T
OJ
Ong JS
HM
Hassall MM
HP
Hysi PG
FP
Foster PJ
KP
Khaw PT
MD
Mackey DA
GP
Gharahkhani P
KA
Khawaja AP
HA
Hewitt AW
CJ
Craig JE
MS
MacGregor S
Chapter II

Abstract

Summary of the research findings

Optic nerve head morphology is affected by several retinal diseases. We measured the vertical optic disc diameter (DD) of the UK Biobank (UKBB) cohort (N = 67 040) and performed the largest genome-wide association study (GWAS) of DD to date. We identified 81 loci (66 novel) for vertical DD. We then replicated the novel loci in International Glaucoma Genetic Consortium (IGGC, N = 22 504) and European Prospective Investigation into Cancer-Norfolk (N = 6005); in general the concordance in effect sizes was very high (correlation in effect size estimates 0.90): 44 of the 66 novel loci were significant at P < 0.05, with 19 remaining significant after Bonferroni correction. We identified another 26 novel loci in the meta-analysis of UKBB and IGGC data. Gene-based analyses identified an additional 57 genes. Human ocular tissue gene expression analysis showed that most of the identified genes are enriched in optic nerve head tissue. Some of the identified loci exhibited pleiotropic effects with vertical cup-to-disc ratio, intraocular pressure, glaucoma and myopia. These results can enhance our understanding of the genetics of optic disc morphology and shed light on the genetic findings for other ophthalmic disorders such as glaucoma and other optic nerve diseases.

67,040 British ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

95549
Total Participants
GWAS
Study Type
Yes
Replicated
28,509 European ancestry individuals
Replication Participants
European
Ancestry
U.K.
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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Analysis In Progress

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