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GWAS Study

Genome-wide association study identifies genetic factors that modify age at onset in Machado-Joseph disease.

Akçimen F, Martins S, Liao C et al.

32205469 PubMed ID
GWAS Study Type
700 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

AF
Akçimen F
MS
Martins S
LC
Liao C
BC
Bourassa CV
CH
Catoire H
NG
Nicholson GA
RO
Riess O
RM
Raposo M
FM
França MC
VJ
Vasconcelos J
LM
Lima M
LI
Lopes-Cendes I
SM
Saraiva-Pereira ML
JL
Jardim LB
SJ
Sequeiros J
DP
Dion PA
RG
Rouleau GA
Chapter II

Abstract

Summary of the research findings

Machado-Joseph disease (MJD/SCA3) is the most common form of dominantly inherited ataxia worldwide. The disorder is caused by an expanded CAG repeat in the ATXN3 gene. Past studies have revealed that the length of the expansion partly explains the disease age at onset (AO) variability of MJD, which is confirmed in this study (Pearson's correlation coefficient R2 = 0.62). Using a total of 786 MJD patients from five different geographical origins, a genome-wide association study (GWAS) was conducted to identify additional AO modifying factors that could explain some of the residual AO variability. We identified nine suggestively associated loci (P < 1 × 10-5). These loci were enriched for genes involved in vesicle transport, olfactory signaling, and synaptic pathways. Furthermore, associations between AO and the TRIM29 and RAG genes suggests that DNA repair mechanisms might be implicated in MJD pathogenesis. Our study demonstrates the existence of several additional genetic factors, along with CAG expansion, that may lead to a better understanding of the genotype-phenotype correlation in MJD.

700 cases

Chapter III

Study Statistics

Key metrics and study information

700
Total Participants
GWAS
Study Type
No
Replicated
Portugal, Germany, Brazil, Canada, U.S., Australia
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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