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GWAS Study

Genome-wide meta-analysis identifies novel loci associated with age-related macular degeneration.

Han X, Gharahkhani P, Mitchell P et al.

32277175 PubMed ID
GWAS Study Type
311644 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

HX
Han X
GP
Gharahkhani P
MP
Mitchell P
LG
Liew G
HA
Hewitt AW
MS
MacGregor S
Chapter II

Abstract

Summary of the research findings

Age-related macular degeneration (AMD) is the leading cause of irreversible blindness among the elderly population. To accelerate the understanding of the genetics of AMD, we conducted a meta-analysis of genome-wide association studies (GWAS) combining data from the International AMD Genomics Consortium AMD-2016 GWAS (16,144 advanced AMD cases and 17,832 controls), AMD-2013 GWAS (17,181 cases and 60,074 controls), and new data on 4017 AMD cases and 14,984 controls from Genetic Epidemiology Research on Aging study. We identified 12 novel AMD loci near or within C4BPA-CD55, ZNF385B, ZBTB38, NFKB1, LINC00461, ADAM19, CPN1, ACSL5, CSK, RLBP1, CLUL1, and LBP. We then replicated the associations of the novel loci in independent cohorts, UK Biobank (5860 cases and 126,726 controls) and FinnGen (1266 cases and 47,560 control). In general, the concordance in effect sizes was very high (correlation in effect size estimates 0.89), 11 of 12 novel loci were in the expected direction, 5 were associated with AMD at a nominal significance level, and rs3825991 (near gene RLBP1) after Bonferroni correction. We identified an additional 21 novel genes using a gene-based test. Most of the novel genes are expressed in retinal tissue and could be involved in the pathogenesis of AMD (i.e., complement, inflammation, and lipid pathways). These findings enhance our understanding of the genetic architecture of AMD and shed light on the biological process underlying AMD pathogenesis.

37,342 European ancestry cases, 92,890 European ancestry controls

Chapter III

Study Statistics

Key metrics and study information

311644
Total Participants
GWAS
Study Type
Yes
Replicated
7,126 European ancestry cases, 174,286 European ancestry controls
Replication Participants
European
Ancestry
Finland, U.K.
Recruitment Country
Chapter IV

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