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GWAS Study

Regulatory SNP of <i>RREB1</i> is Associated With Bone Mineral Density in Chinese Postmenopausal Osteoporosis Patients.

Feng S, Wang H, Yan Y et al.

34868232 PubMed ID
GWAS Study Type
341 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

FS
Feng S
WH
Wang H
YY
Yan Y
SX
Su X
AJ
Ao J
CW
Chen W
Chapter II

Abstract

Summary of the research findings

Postmenopausal osteoporosis (PMO) is the most common bone disorder in elderly Chinese women. Although genetic factors have been shown to have a pivotal role in PMO, studies on genetic loci associated with PMO in Chinese individuals are still lacking. We aimed to identify SNPs that contribute to PMO in Chinese individuals by conducting a genome-wide association study (GWAS). Bone mineral density (BMD) of postmenopausal Chinese women was assessed. Participants with T-score &lt; -2.5 standard deviations (n = 341) were recruited and divided into a discovery group (n = 150) and a replication group (n = 191). GWAS was performed, with T-score as the quantitative trait, using linear regression. Our results revealed that an SNP cluster upstream of RREB1 showed a trend of association with BMD in Chinese PMO patients. The leading SNP of the cluster was rs475011 (p combined = 1.15 × 10-6, beta = 0.51), which is a splicing quantitative trait locus (sQTL) of RREB1. This association was further supported by data from the UK Biobank (UKBB; p = 9.56 × 10-12). The high BMD-associated allele G of rs475011 is related to a high intron excision ratio. This SNP may increase BMD by upregulating mature RREB1 mRNA, based on data from the Genotype-Tissue Expression (GTEx) database. We identified BMD-associated SNPs that regulate RREB1 in Chinese PMO patients. Future functional experiments are needed to further link rs475011, RREB1, and PMO in Chinese individuals.

150 Han Chinese ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

341
Total Participants
GWAS
Study Type
Yes
Replicated
191 Han Chinese ancestry individuals
Replication Participants
East Asian
Ancestry
China
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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