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GWAS Study

Genome-wide interaction analysis identified low-frequency variants with sex disparity in lung cancer risk.

Li Y, Xiao X, Li J et al.

35138370 PubMed ID
GWAS Study Type
24223 Participants
36 Views
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

LY
Li Y
XX
Xiao X
LJ
Li J
BJ
Byun J
CC
Cheng C
BY
Bossé Y
MJ
McKay J
AD
Albanes D
LS
Lam S
TA
Tardon A
CC
Chen C
BS
Bojesen SE
LM
Landi MT
JM
Johansson M
RA
Risch A
BH
Bickeböller H
WH
Wichmann HE
CD
Christiani DC
RG
Rennert G
AS
Arnold S
GG
Goodman G
FJ
Field JK
DM
Davies MPA
SS
Shete SS
LM
Le Marchand L
MO
Melander O
BH
Brunnström H
LG
Liu G
HR
Hung RJ
AA
Andrew AS
KL
Kiemeney LA
SH
Shen H
SR
Sun R
ZS
Zienolddiny S
GK
Grankvist K
JM
Johansson M
CN
Caporaso N
TD
Teare DM
HY
Hong YC
LP
Lazarus P
SM
Schabath MB
AM
Aldrich MC
SA
Schwartz AG
GI
Gorlov I
PK
Purrington K
YP
Yang P
LY
Liu Y
HY
Han Y
BJ
Bailey-Wilson JE
PS
Pinney SM
MD
Mandal D
WJ
Willey JC
GC
Gaba C
BP
Brennan P
AC
Amos CI
Chapter II

Abstract

Summary of the research findings

Differences by sex in lung cancer incidence and mortality have been reported which cannot be fully explained by sex differences in smoking behavior, implying existence of genetic and molecular basis for sex disparity in lung cancer development. However, the information about sex dimorphism in lung cancer risk is quite limited despite the great success in lung cancer association studies. By adopting a stringent two-stage analysis strategy, we performed a genome-wide gene-sex interaction analysis using genotypes from a lung cancer cohort including ~ 47 000 individuals with European ancestry. Three low-frequency variants (minor allele frequency < 0.05), rs17662871 [odds ratio (OR) = 0.71, P = 4.29×10-8); rs79942605 (OR = 2.17, P = 2.81×10-8) and rs208908 (OR = 0.70, P = 4.54×10-8) were identified with different risk effect of lung cancer between men and women. Further expression quantitative trait loci and functional annotation analysis suggested rs208908 affects lung cancer risk through differential regulation of Coxsackie virus and adenovirus receptor gene expression in lung tissues between men and women. Our study is one of the first studies to provide novel insights about the genetic and molecular basis for sex disparity in lung cancer development.

24,223 European ancestry cases

Chapter III

Study Statistics

Key metrics and study information

24223
Total Participants
GWAS
Study Type
No
Replicated
European
Ancestry
Chapter IV

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