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mtDNA Haplogroup • Maternal Lineage

F4B1

mtDNA Haplogroup F4B1

~9,000 years ago
Southeast Asia
0 subclades
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Chapter I

The Story

The journey of mtDNA haplogroup F4B1

Origins and Evolution

mtDNA haplogroup F4B1 sits within the broader haplogroup F phylogeny, a maternally inherited lineage that arose in East/Southeast Asia. As a subclade of F4 (and more specifically nested under F4BA in Phylotree nomenclature), F4B1 represents a relatively recent branching event in the Holocene. Age estimates for internal F4 subclades vary in the literature, and for F4B1 an origin in the early-to-middle Holocene (roughly ~9 kya, with substantial uncertainty) is a reasonable working hypothesis based on the diversification times of neighboring F4 lineages.

Because F4B1 is an intermediate and understudied clade, its molecular signature and internal diversity are not yet well sampled in published large-scale datasets. Additional complete mitogenome sequencing from targeted populations is required to refine the phylogenetic placement, coalescence age, and diagnostic mutations of F4B1.

Subclades

F4B1 itself is an internal node beneath F4BA in current reference trees. Where sufficient sampling exists, F4 lineages show additional branching (e.g., F4B, F4a, etc.) that reflect localized population histories. At present, F4B1 may have minor downstream subbranches in particular island or coastal populations, but those subclades require confirmation through deeper mitogenome sampling. Researchers should treat reported subclade assignments as provisional until reinforced by multiple full mitogenomes and phylogenetic analyses.

Geographical Distribution

Based on the placement of F4 and related subclades, and on published population surveys of East and Southeast Asia, F4B1 is most plausibly concentrated in Mainland and Insular Southeast Asia and at low frequencies in adjacent parts of southern China and Near Oceania. The pattern is consistent with maternal lineages that diversified in the Holocene and were carried during coastal and island expansions, including connections with Austronesian-speaking groups. However, F4B1 appears to be rare and patchily distributed; its presence in any given population should be confirmed through complete mitochondrial sequencing.

Historical and Cultural Significance

Because F4B1 is uncommon in published datasets, direct archaeological associations are tentative. Reasonable inferences link F4B1 to coastal Holocene demographic processes in Southeast Asia — including the spread of Neolithic adaptations (rice agriculture and coastal resource economies) and later Austronesian dispersal events. If F4B1 is confirmed in island populations or in Lapita-associated remains, that would point to a role in seafaring-mediated gene flow into Near and Remote Oceania. At present, its cultural significance is best described as associated with regional Holocene population movements rather than tied to a single well-documented archaeological culture.

Conclusion

mtDNA F4B1 is a useful marker for understanding fine-scale maternal history in Southeast Asia and nearby island regions, but it remains under-characterized. Improving resolution will require targeted mitogenome sequencing in understudied groups (e.g., specific Austronesian-speaking communities, coastal hunter-gatherers, and inland farmer groups) and integration of ancient DNA results. Until then, statements about precise age, distribution, and archaeological associations should remain cautious and provisional.

Key Points

  • Origins and Evolution
  • Subclades
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 F4B1 Current ~9,000 years ago 🌾 Neolithic 9,000 years 0 0 0
2 F4BA — — — 1 0 0
3 F4B ~6,000 years ago 🪨 Chalcolithic 6,000 years 1 8 6
4 F4 ~9,000 years ago 🌾 Neolithic 9,000 years 2 16 0
5 F ~28,000 years ago 🦴 Paleolithic 28,000 years 4 210 6
6 R9 ~40,000 years ago 🦴 Paleolithic 40,000 years 3 225 0
7 R ~55,000 years ago 🦴 Paleolithic 55,000 years 17 17,854 57
8 NA — — — 1 17,854 0
9 N ~60,000 years ago 🦴 Paleolithic 60,000 years 16 20,371 13
10 L3 ~70,000 years ago 🦴 Paleolithic 70,000 years 7 23,542 6
11 L3'4 — — — 2 23,581 0
12 L3'4'6 — — — 2 23,584 0
13 L2'3'4'6 — — — 2 24,475 0
14 L2'3'4'5'6'7 — — — 2 24,488 0
15 L1'2'3'4'5'6'7 — — — 2 24,903 0
16 L ~160,000 years ago 🦴 Paleolithic 160,000 years 2 25,205 5

Subclades (0)

Terminal branch - no known subclades

Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

Southeast Asia

Modern Distribution

The populations where mtDNA haplogroup F4B1 is found include:

  1. Taiwanese indigenous Austronesian groups (e.g., Amis, Atayal) — potential carriers in small numbers
  2. Philippine populations (Luzon and Visayas island groups)
  3. Insular Southeast Asia (parts of Indonesia, Borneo, Sulawesi) among local island populations
  4. Mainland Southeast Asia (Vietnam, Thailand, coastal Laos) at low frequencies
  5. Southern China (Guangdong/Guangxi region) and, rarely, Ryukyuan/Japanese island populations
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~9k years ago

Haplogroup F4B1

Your mtDNA haplogroup emerged in Southeast Asia

Southeast Asia
~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup F4B1

Cultural Heritage

These ancient cultures have been linked to haplogroup F4B1 based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Chinese Bronze-Iron Early Kazakh Iron Late Medieval Mongolian Roman Republic Taiwanese Iron Ust-Belaya Culture Yellow River Culture
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

5 direct carriers of haplogroup F4B1

5 / 5 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual I3736 from Taiwan, dated 1 CE - 800 CE
I3736
Taiwan Iron Age Taiwan 1 CE - 800 CE Taiwanese Iron F4b1 Direct
Portrait of ancient individual I14926 from Taiwan, dated 1 CE - 800 CE
I14926
Taiwan Iron Age Taiwan 1 CE - 800 CE Taiwanese Iron F4b1 Direct
Portrait of ancient individual I15160 from Taiwan, dated 1 CE - 800 CE
I15160
Taiwan Iron Age Taiwan 1 CE - 800 CE Taiwanese Iron F4b1 Direct
Portrait of ancient individual I15159 from Taiwan, dated 1 CE - 800 CE
I15159
Taiwan Iron Age Taiwan 1 CE - 800 CE Taiwanese Iron F4b1 Direct
Portrait of ancient individual I3617 from Taiwan, dated 246 CE - 365 CE
I3617
Taiwan Iron Age Taiwan 246 CE - 365 CE Taiwanese Iron F4b1 Direct
Chapter VI

Carrier Distribution Map

Geographic distribution of 5 ancient DNA samples (direct and subclade carriers of F4B1)

Direct carrier
Time Period Filter
All Time Periods
Showing all samples
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution by country of origin (direct and subclade carriers shown by default)

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods (direct and subclade carriers shown by default)

Data

Data & Provenance

Source information and data quality

Last Updated 2026-06-14
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.