Menu
Currency
GWAS Study

Whole-genome sequence-based analysis of thyroid function.

Taylor PN, Porcu E, Chew S et al.

25743335 PubMed ID
GWAS Study Type
16335 Participants
28 Views
Scroll to explore
Chapter I

Publication Details

Comprehensive information about this research publication

Authors

TP
Taylor PN
PE
Porcu E
CS
Chew S
CP
Campbell PJ
TM
Traglia M
BS
Brown SJ
MB
Mullin BH
SH
Shihab HA
MJ
Min J
WK
Walter K
MY
Memari Y
HJ
Huang J
BM
Barnes MR
BJ
Beilby JP
CP
Charoen P
DP
Danecek P
DF
Dudbridge F
FV
Forgetta V
GC
Greenwood C
GE
Grundberg E
JA
Johnson AD
HJ
Hui J
LE
Lim EM
MS
McCarthy S
MD
Muddyman D
PV
Panicker V
PJ
Perry JR
BJ
Bell JT
YW
Yuan W
RC
Relton C
GT
Gaunt T
SD
Schlessinger D
AG
Abecasis G
CF
Cucca F
SG
Surdulescu GL
WW
Woltersdorf W
ZE
Zeggini E
ZH
Zheng HF
TD
Toniolo D
DC
Dayan CM
NS
Naitza S
WJ
Walsh JP
ST
Spector T
DS
Davey Smith G
DR
Durbin R
RJ
Richards JB
SS
Sanna S
SN
Soranzo N
TN
Timpson NJ
WS
Wilson SG
Chapter II

Abstract

Summary of the research findings

Normal thyroid function is essential for health, but its genetic architecture remains poorly understood. Here, for the heritable thyroid traits thyrotropin (TSH) and free thyroxine (FT4), we analyse whole-genome sequence data from the UK10K project (N=2,287). Using additional whole-genome sequence and deeply imputed data sets, we report meta-analysis results for common variants (MAF≥1%) associated with TSH and FT4 (N=16,335). For TSH, we identify a novel variant in SYN2 (MAF=23.5%, P=6.15 × 10(-9)) and a new independent variant in PDE8B (MAF=10.4%, P=5.94 × 10(-14)). For FT4, we report a low-frequency variant near B4GALT6/SLC25A52 (MAF=3.2%, P=1.27 × 10(-9)) tagging a rare TTR variant (MAF=0.4%, P=2.14 × 10(-11)). All common variants explain ≥20% of the variance in TSH and FT4. Analysis of rare variants (MAF<1%) using sequence kernel association testing reveals a novel association with FT4 in NRG1. Our results demonstrate that increased coverage in whole-genome sequence association studies identifies novel variants associated with thyroid function.

2,287 European ancestry whole-genome sequenced individuals, 14,048 European ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

16335
Total Participants
GWAS
Study Type
No
Replicated
European
Ancestry
Australia, U.K., Italy
Recruitment Country
Chapter IV

AI-Generated Summary

AI-generated by DNAGENICS

Independent AI summary of health and genetic findings from the published study

Important: This summary is AI-generated by DNAGENICS for informational purposes only. It was not created by, affiliated with, or endorsed by the researchers behind the original publication, and is based solely on that published research. It may contain errors or omissions. DNAGENICS disclaims all liability for any inaccuracies or consequences arising from use of this information. Verify all information against the original publication. This is not professional scientific review or medical advice.

AI Summary In Progress

Our AI-generated summary of this publication is being prepared. Please check back soon.