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GWAS Study

Sequence variation at ANAPC1 accounts for 24% of the variability in corneal endothelial cell density.

Ivarsdottir EV, Benonisdottir S, Thorleifsson G et al.

30894546 PubMed ID
GWAS Study Type
6125 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

IE
Ivarsdottir EV
BS
Benonisdottir S
TG
Thorleifsson G
SP
Sulem P
OA
Oddsson A
SU
Styrkarsdottir U
KS
Kristmundsdottir S
AG
Arnadottir GA
TG
Thorgeirsson G
JI
Jonsdottir I
ZG
Zoega GM
TU
Thorsteinsdottir U
GD
Gudbjartsson DF
JF
Jonasson F
HH
Holm H
SK
Stefansson K
Chapter II

Abstract

Summary of the research findings

The corneal endothelium is vital for transparency and proper hydration of the cornea. Here, we conduct a genome-wide association study of corneal endothelial cell density (cells/mm2), coefficient of cell size variation (CV), percentage of hexagonal cells (HEX) and central corneal thickness (CCT) in 6,125 Icelanders and find associations at 10 loci, including 7 novel. We assess the effects of these variants on various ocular biomechanics such as corneal hysteresis (CH), as well as eye diseases such as glaucoma and corneal dystrophies. Most notably, an intergenic variant close to ANAPC1 (rs78658973[A], frequency = 28.3%) strongly associates with decreased cell density and accounts for 24% of the population variance in cell density (β = -0.77 SD, P = 1.8 × 10-314) and associates with increased CH (β = 0.19 SD, P = 2.6 × 10-19) without affecting risk of corneal diseases and glaucoma. Our findings indicate that despite correlations between cell density and eye diseases, low cell density does not increase the risk of disease.

6,125 Icelandic ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

6125
Total Participants
GWAS
Study Type
Yes
Replicated
1,459 Icelandic ancestry individuals
Replication Participants
European
Ancestry
Iceland
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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