Menu
mtDNA Haplogroup • Maternal Lineage

B4B1A3A

mtDNA Haplogroup B4B1A3A

~2,000 years ago
Island Southeast Asia (coastal)
0 subclades
7 ancient samples
Scroll to explore
Chapter I

The Story

The journey of mtDNA haplogroup B4B1A3A

Origins and Evolution

mtDNA haplogroup B4B1A3A is a derived subclade of B4B1A3, itself part of the broader B4 branch which has a long history in East and Island Southeast Asia. Given the parent clade's estimated emergence in the late Holocene (~3.5 kya) and the phylogenetic position of B4B1A3A within that branch, B4B1A3A most plausibly arose during the Late Holocene (roughly 2–3 kya). Its emergence is consistent with fine‑scale diversification that accompanied continued maritime movements, localized expansions, and island‑to‑island gene flow associated with Austronesian dispersals and later coastal demographic processes.

Subclades (if applicable)

B4B1A3A is a defined downstream lineage of B4B1A3. Current sampling and published datasets indicate relatively few deeply characterized downstream subclades of B4B1A3A, so much of its internal structure remains sparsely resolved. As more complete mitogenomes from Island Southeast Asia and Near Oceania are published, additional sublineages may be identified, revealing finer geographic patterns (for example, island‑restricted branches or clades tied to specific ethnolinguistic groups).

Geographical Distribution

B4B1A3A is primarily recorded in coastal and island populations of Island Southeast Asia (ISEA) and adjacent regions. Modern DNA surveys and limited ancient DNA finds place the haplogroup at low to moderate frequencies in: indigenous Taiwanese (Austronesian‑speaking groups), populations of the Philippines and eastern Indonesia, coastal communities of Borneo and Sulawesi, some coastal mainland Southeast Asian groups, and in contact zones of Near Oceania (particularly populations with historical Lapita or Austronesian influence). It also occurs at low frequencies in coastal East Asian populations (coastal China, Taiwan, southern Japan) reflecting maritime networks and historical gene flow.

Ancient DNA recovery for B4B1A3A is limited but consistent with a late Holocene, maritime‑associated distribution. Its presence in modern coastal and island populations, and occasional identification in archaeological samples from Lapita‑associated contexts or later island assemblages, supports a scenario of seaborne dispersal and local differentiation rather than a deep inland origin.

Historical and Cultural Significance

B4B1A3A fits the broader pattern of Austronesian‑linked maternal lineages that spread through maritime Southeast Asia during the Late Holocene. While not a diagnostic ‘‘Polynesian motif’’ lineage, it is part of the mosaic of maternal haplogroups carried by Austronesian speakers and by coastal communities engaged in fishing, trade, and island settlement. The haplogroup's geographic pattern reflects maritime adaptation, island colonization, and post‑Neolithic coastal demographic processes—including interisland exchange, secondary founder events, and admixture with Papuan‑related populations in Near Oceania.

From a cultural perspective, B4B1A3A is best understood as one genetic signal among many that track the spread of seafaring economies and Austronesian languages; it neither defines a single culture nor explains linguistic change on its own, but it contributes to the maternal genetic signature of communities involved in maritime expansion.

Conclusion

B4B1A3A is a relatively recent, regionally concentrated mtDNA subclade whose distribution and timing are consistent with late Holocene maritime expansions in Island Southeast Asia and adjacent Near Oceanic contact zones. Continued mitogenome sequencing across island and coastal populations, and additional ancient DNA from late Holocene archaeological sites, will refine its internal phylogeny and clarify island‑specific histories of dispersal and admixture.

Key Points

  • Origins and Evolution
  • Subclades (if applicable)
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 B4B1A3A Current ~2,000 years ago 🏺 Classical Antiquity 2,500 years 0 0 7
2 B4B1A3 ~4,000 years ago 🔶 Bronze Age 3,500 years 1 0 0
3 B4B1A ~9,000 years ago 🌾 Neolithic 9,000 years 2 14 2
4 B4B1 ~18,000 years ago 🏹 Mesolithic 18,000 years 2 18 0
5 B4B ~18,000 years ago 🏹 Mesolithic 18,000 years 1 19 0
6 B4 ~28,000 years ago 🦴 Paleolithic 28,000 years 6 334 7
7 B ~50,000 years ago 🦴 Paleolithic 50,000 years 4 1,196 75

Subclades (0)

Terminal branch - no known subclades

Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

Island Southeast Asia (coastal)

Modern Distribution

The populations where mtDNA haplogroup B4B1A3A is found include:

  1. Indigenous Taiwanese (Austronesian‑speaking groups)
  2. Philippine island populations (various ethnolinguistic groups)
  3. Eastern Indonesian communities (Maluku, Nusa Tenggara)
  4. Borneo and Sulawesi coastal populations
  5. Coastal and island communities of mainland Southeast Asia (Vietnam, Malay Peninsula) at low frequencies
  6. Micronesian and some peripheral Polynesian‑adjacent islanders at low frequencies
  7. Insular Melanesian contact‑zone groups (Near Oceania) where Austronesian influence occurred
  8. Coastal East Asian groups (coastal China, southern Japan) at low frequencies
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

~2k years ago

Haplogroup B4B1A3A

Your mtDNA haplogroup emerged in Island Southeast Asia (coastal)

Island Southeast Asia (coastal)
Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup B4B1A3A

Cultural Heritage

These ancient cultures have been linked to haplogroup B4B1A3A based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Avar Culture Early Avar Historical Malaysian Pohnpei Culture Saudeleur Culture Taiwanese Iron
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

7 direct carriers of haplogroup B4B1A3A

7 / 7 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual FGD-4 from Hungary, dated 550 CE - 636 CE
FGD-4
Hungary Early Avar Period Hungary 550 CE - 636 CE Early Avar B4b1a3a Direct
Portrait of ancient individual KUP025 from Hungary, dated 580 CE - 670 CE
KUP025
Hungary Early Avar Period Hungary 580 CE - 670 CE Early Avar B4b1a3a Direct
Portrait of ancient individual KFP-30a from Hungary, dated 630 CE - 660 CE
KFP-30a
Hungary Early Avar Period Hungary 630 CE - 660 CE Early Avar B4b1a3a Direct
Portrait of ancient individual ARK-41 from Hungary, dated 650 CE - 775 CE
ARK-41
Hungary Middle to Late Avar Period Hungary 650 CE - 775 CE Avar Culture B4b1a3a Direct
Portrait of ancient individual RKF163 from Hungary, dated 650 CE - 900 CE
RKF163
Hungary Middle Avar Period Hungary 650 CE - 900 CE Avar Culture B4b1a3a Direct
Portrait of ancient individual RKF181 from Hungary, dated 650 CE - 900 CE
RKF181
Hungary Middle Avar Period Hungary 650 CE - 900 CE Avar Culture B4b1a3a Direct
Portrait of ancient individual CSPF-213 from Hungary, dated 675 CE - 725 CE
CSPF-213
Hungary Late Avar Period Hungary 675 CE - 725 CE Avar Culture B4b1a3a Direct
Chapter VI

Carrier Distribution Map

Geographic distribution of 7 ancient DNA samples (direct and subclade carriers of B4B1A3A)

Direct carrier
Time Period Filter
All Time Periods
Showing all samples
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution by country of origin (direct and subclade carriers shown by default)

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods (direct and subclade carriers shown by default)

Data

Data & Provenance

Source information and data quality

Last Updated 2026-02-16
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.