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mtDNA Haplogroup • Maternal Lineage

C1B45

mtDNA Haplogroup C1B45

~6,000 years ago
Andean South America
0 subclades
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Chapter I

The Story

The journey of mtDNA haplogroup C1B45

Origins and Evolution

Haplogroup C1B45 is a downstream branch of the C1b lineage, itself part of the broader mtDNA haplogroup C1 that traces its ultimate origin to Northeast Asia / Beringia and is one of the founding maternal lineages of the Americas. Given its phylogenetic position beneath C1B4 and the geographic distribution of related subclades, C1B45 most plausibly arose within the Americas after initial Late Pleistocene–early Holocene migrations across Beringia. The estimated time depth (on the order of a few thousand years after continental entry) places its formation in the Middle Holocene, consistent with localized diversification of maternal lineages as populations expanded and adapted to varied South American environments.

C1B45 is defined by private mutations that occur downstream of the diagnostic markers for C1B4; because it is a relatively derived subclade, it is rarer than parent and sibling lineages and tends to be observed in geographically restricted Indigenous groups.

Subclades

As a derived branch of C1B4, C1B45 may itself contain internal variation in larger datasets, but currently it is treated as a terminal or near-terminal subclade in many phylogenies due to limited sample representation. Continued ancient and modern sampling in the Andes and Amazon may reveal further downstream diversification; at present, documented diversity within C1B45 is low relative to older, more broadly distributed Native American haplogroups.

Geographical Distribution

C1B45 is primarily associated with populations in South America, especially highland Andean groups and some Amazonian communities. Low-frequency occurrences or isolated detections can also be expected in northwestern North America (Alaska, Pacific Northwest) and among Arctic-adjacent groups as a result of prehistoric population movement and later demographic processes, but such occurrences are uncommon. The pattern—concentration in South America with rare northern detections—is consistent with a subclade that diversified after the initial peopling of the Americas and then expanded regionally within South America.

Genetic studies and published mtDNA surveys report C1b-derived subclades in Andean and Amazonian contexts; C1B45 specifically has been observed in modern Indigenous individuals from Andean highland populations and in a limited number of archaeological specimens, indicating both prehistoric and continuing maternal-line presence.

Historical and Cultural Significance

Because C1B45 appears concentrated in parts of the Andes and adjacent lowland regions, its carriers would have been participants in the rich tapestry of pre-Columbian South American cultural trajectories—ranging from mobile hunter-gatherer and early Holocene forager groups through later complex societies in the highlands and riverine lowlands. While attribution of a single mtDNA subclade to any particular archaeological culture (e.g., Wari, Tiwanaku, Inca) is not generally possible without direct ancient DNA from securely dated contexts, the presence of C1B45 in Andean populations links it to the maternal ancestry of populations involved in those cultural developments.

From a population-genetic perspective, C1B45 contributes to understanding regional female-line continuity, local founder effects, and the microevolutionary processes that shaped South American maternal diversity following the initial peopling from Beringia.

Conclusion

C1B45 is a derived, regionally focused mtDNA lineage within the Native American C1b clade. Its origin in the Holocene within South America, restricted present-day distribution, and detection in both modern Indigenous and a small number of archaeological samples make it valuable for studies of regional population history, maternal continuity, and post-glacial diversification in the Americas. Expanded sampling—especially ancient DNA from well-dated Andean and Amazonian contexts—will clarify its precise antiquity, substructure, and historical role.

Key Points

  • Origins and Evolution
  • Subclades
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 C1B45 Current ~6,000 years ago 🪨 Chalcolithic 6,000 years 0 0 0
2 C1B4 ~12,000 years ago 🌾 Neolithic 12,000 years 3 24 0
3 C1B ~15,000 years ago 🏹 Mesolithic 15,000 years 5 114 198
4 C1 ~18,000 years ago 🏹 Mesolithic 18,000 years 5 562 5
5 C ~35,000 years ago 🦴 Paleolithic 35,000 years 5 617 75

Subclades (0)

Terminal branch - no known subclades

Siblings (2)

Other branches from the same parent haplogroup

Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

Andean South America

Modern Distribution

The populations where mtDNA haplogroup C1B45 is found include:

  1. Indigenous Andean highland groups (e.g., Quechua, Aymara and related populations)
  2. Amazonian indigenous populations (selected riverine and upland groups)
  3. Selected Native North American groups (Alaska, Pacific Northwest — rare occurrences)
  4. Arctic and sub-Arctic peoples (Inuit, Yupik — very low frequency/occasional)
  5. Siberian and Beringian-adjacent populations (very rare or isolated occurrences)
  6. Ancient precontact archaeological samples from the Americas (where identified)
  7. Modern admixed populations in the Americas with Indigenous maternal ancestry
  8. Localized tribal/ethnic groups with strong maternal founder effects in South America
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~6k years ago

Haplogroup C1B45

Your mtDNA haplogroup emerged in Andean South America

Andean South America
~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup C1B45

Cultural Heritage

These ancient cultures have been linked to haplogroup C1B45 based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Ancient Beringian Arroyo Seco Island Chumash Laguna Chica Late Paleoindian Belize Lavoutte Culture Los Rieles
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

9 direct carriers of haplogroup C1B45

9 / 9 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual CT-01 from USA, dated 1440 CE - 1634 CE
CT-01
USA Late Santa Cruz Island, California, USA 1440 CE - 1634 CE Island Chumash C1b45 Direct
Portrait of ancient individual CT-01 from USA, dated 1440 CE - 1634 CE
CT-01
USA The First Peoples of North America 1440 CE - 1634 CE C1b45 Direct
Portrait of ancient individual I11974 from Chile, dated 10420 BCE - 9450 BCE
I11974
Chile Los Rieles Site, Chile 12,000 Years Ago 10420 BCE - 9450 BCE Los Rieles C1b45 Direct
Portrait of ancient individual I11974 from Chile, dated 10420 BCE - 9450 BCE
I11974
Chile Ancient South America 10420 BCE - 9450 BCE C1b45 Direct
Portrait of ancient individual I11974 from Chile, dated 10420 BCE - 9450 BCE
I11974
Chile Ancient South America 10420 BCE - 9450 BCE C1b45 Direct
Portrait of ancient individual I11974 from Chile, dated 10420 BCE - 9450 BCE
I11974
Chile Ancient South America 10420 BCE - 9450 BCE C1b45 Direct
Portrait of ancient individual I11974 from Chile, dated 10420 BCE - 9450 BCE
I11974
Chile Ancient South America 10420 BCE - 9450 BCE C1b45 Direct
Portrait of ancient individual I11974 from Chile, dated 10420 BCE - 9450 BCE
I11974
Chile Ancient South America 10420 BCE - 9450 BCE C1b45 Direct
Portrait of ancient individual I11974 from Chile, dated 10420 BCE - 9450 BCE
I11974
Chile Ancient South America 10420 BCE - 9450 BCE C1b45 Direct
Chapter VI

Carrier Distribution Map

Geographic distribution of 9 ancient DNA samples (direct and subclade carriers of C1B45)

Direct carrier
Time Period Filter
All Time Periods
Showing all samples
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution by country of origin (direct and subclade carriers shown by default)

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods (direct and subclade carriers shown by default)

Data

Data & Provenance

Source information and data quality

Last Updated 2026-02-16
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.