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GWAS Study

Genome-wide association study identifies genetic loci for self-reported habitual sleep duration supported by accelerometer-derived estimates.

Dashti HS, Jones SE, Wood AR et al.

30846698 PubMed ID
GWAS Study Type
503852 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

DH
Dashti HS
JS
Jones SE
WA
Wood AR
LJ
Lane JM
VH
van Hees VT
WH
Wang H
RJ
Rhodes JA
SY
Song Y
PK
Patel K
AS
Anderson SG
BR
Beaumont RN
BD
Bechtold DA
BJ
Bowden J
CB
Cade BE
GM
Garaulet M
KS
Kyle SD
LM
Little MA
LA
Loudon AS
LA
Luik AI
SF
Scheer FAJL
SK
Spiegelhalder K
TJ
Tyrrell J
GD
Gottlieb DJ
TH
Tiemeier H
RD
Ray DW
PS
Purcell SM
FT
Frayling TM
RS
Redline S
LD
Lawlor DA
RM
Rutter MK
WM
Weedon MN
SR
Saxena R
Chapter II

Abstract

Summary of the research findings

Sleep is an essential state of decreased activity and alertness but molecular factors regulating sleep duration remain unknown. Through genome-wide association analysis in 446,118 adults of European ancestry from the UK Biobank, we identify 78 loci for self-reported habitual sleep duration (p < 5 × 10-8; 43 loci at p < 6 × 10-9). Replication is observed for PAX8, VRK2, and FBXL12/UBL5/PIN1 loci in the CHARGE study (n = 47,180; p < 6.3 × 10-4), and 55 signals show sign-concordant effects. The 78 loci further associate with accelerometer-derived sleep duration, daytime inactivity, sleep efficiency and number of sleep bouts in secondary analysis (n = 85,499). Loci are enriched for pathways including striatum and subpallium development, mechanosensory response, dopamine binding, synaptic neurotransmission and plasticity, among others. Genetic correlation indicates shared links with anthropometric, cognitive, metabolic, and psychiatric traits and two-sample Mendelian randomization highlights a bidirectional causal link with schizophrenia. This work provides insights into the genetic basis for inter-individual variation in sleep duration implicating multiple biological pathways.

106,192 European ancestry cases, 305,742 European ancestry controls

Chapter III

Study Statistics

Key metrics and study information

503852
Total Participants
GWAS
Study Type
Yes
Replicated
47,180 adults, 10,554 children or adolescents
Replication Participants
European
Ancestry
U.K.
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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Analysis In Progress

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