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GWAS Study

Genome-wide meta-analysis points to CTC1 and ZNF676 as genes regulating telomere homeostasis in humans.

Mangino M, Hwang SJ, Spector TD et al.

23001564 PubMed ID
GWAS Study Type
11416 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

MM
Mangino M
HS
Hwang SJ
ST
Spector TD
HS
Hunt SC
KM
Kimura M
FA
Fitzpatrick AL
CL
Christiansen L
PI
Petersen I
EC
Elbers CC
HT
Harris T
CW
Chen W
SS
Srinivasan SR
KJ
Kark JD
BA
Benetos A
ES
El Shamieh S
VS
Visvikis-Siest S
CK
Christensen K
BG
Berenson GS
VA
Valdes AM
VA
Viñuela A
GM
Garcia M
AD
Arnett DK
BU
Broeckel U
PM
Province MA
PJ
Pankow JS
KC
Kammerer C
LY
Liu Y
NM
Nalls M
TS
Tishkoff S
TF
Thomas F
ZE
Ziv E
PB
Psaty BM
BJ
Bis JC
RJ
Rotter JI
TK
Taylor KD
SE
Smith E
SN
Schork NJ
LD
Levy D
AA
Aviv A
Chapter II

Abstract

Summary of the research findings

Leukocyte telomere length (LTL) is associated with a number of common age-related diseases and is a heritable trait. Previous genome-wide association studies (GWASs) identified two loci on chromosomes 3q26.2 (TERC) and 10q24.33 (OBFC1) that are associated with the inter-individual LTL variation. We performed a meta-analysis of 9190 individuals from six independent GWAS and validated our findings in 2226 individuals from four additional studies. We confirmed previously reported associations with OBFC1 (rs9419958 P = 9.1 × 10(-11)) and with the telomerase RNA component TERC (rs1317082, P = 1.1 × 10(-8)). We also identified two novel genomic regions associated with LTL variation that map near a conserved telomere maintenance complex component 1 (CTC1; rs3027234, P = 3.6 × 10(-8)) on chromosome17p13.1 and zinc finger protein 676 (ZNF676; rs412658, P = 3.3 × 10(-8)) on 19p12. The minor allele of rs3027234 was associated with both shorter LTL and lower expression of CTC1. Our findings are consistent with the recent observations that point mutations in CTC1 cause short telomeres in both Arabidopsis and humans affected by a rare Mendelian syndrome. Overall, our results provide novel insights into the genetic architecture of inter-individual LTL variation in the general population.

9,190 European ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

11416
Total Participants
GWAS
Study Type
Yes
Replicated
2,226 individuals
Replication Participants
European
Ancestry
Chapter IV

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