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GWAS Study

Susceptibility to neurofibrillary tangles: role of the PTPRD locus and limited pleiotropy with other neuropathologies.

Chibnik LB, White CC, Mukherjee S et al.

28322283 PubMed ID
GWAS Study Type
1278 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

CL
Chibnik LB
WC
White CC
MS
Mukherjee S
RT
Raj T
YL
Yu L
LE
Larson EB
MT
Montine TJ
KC
Keene CD
SJ
Sonnen J
SJ
Schneider JA
CP
Crane PK
SJ
Shulman JM
BD
Bennett DA
DJ
De Jager PL
Chapter II

Abstract

Summary of the research findings

Tauopathies, including Alzheimer's disease (AD) and other neurodegenerative conditions, are defined by a pathological hallmark: neurofibrillary tangles (NFTs). NFT accumulation is thought to be closely linked to cognitive decline in AD. Here, we perform a genome-wide association study for NFT pathologic burden and report the association of the PTPRD locus (rs560380, P=3.8 × 10-8) in 909 prospective autopsies. The association is replicated in an independent data set of 369 autopsies. The association of PTPRD with NFT is not dependent on the accumulation of amyloid pathology. In contrast, we found that the ZCWPW1 AD susceptibility variant influences NFT accumulation and that this effect is mediated by an accumulation of amyloid β plaques. We also performed complementary analyses to identify common pathways that influence multiple neuropathologies that coexist with NFT and found suggestive evidence that certain loci may influence multiple different neuropathological traits, including tau, amyloid β plaques, vascular injury and Lewy bodies. Overall, these analyses offer an evaluation of genetic susceptibility to NFT, a common end point for multiple different pathologic processes.

909 European ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

1278
Total Participants
GWAS
Study Type
Yes
Replicated
369 individuals
Replication Participants
European
Ancestry
U.S.
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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