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GWAS Study

GRM7 variants confer susceptibility to age-related hearing impairment.

Friedman RA, Van Laer L, Huentelman MJ et al.

19047183 PubMed ID
GWAS Study Type
1822 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

FR
Friedman RA
VL
Van Laer L
HM
Huentelman MJ
SS
Sheth SS
VE
Van Eyken E
CJ
Corneveaux JJ
TW
Tembe WD
HR
Halperin RF
TA
Thorburn AQ
TS
Thys S
BS
Bonneux S
FE
Fransen E
HJ
Huyghe J
PI
Pyykkö I
CC
Cremers CW
KH
Kremer H
DI
Dhooge I
SD
Stephens D
OE
Orzan E
PM
Pfister M
BM
Bille M
PA
Parving A
SM
Sorri M
VD
Van de Heyning PH
ML
Makmura L
OJ
Ohmen JD
LF
Linthicum FH
FJ
Fayad JN
PJ
Pearson JV
CD
Craig DW
SD
Stephan DA
VC
Van Camp G
Chapter II

Abstract

Summary of the research findings

Age-related hearing impairment (ARHI), or presbycusis, is the most prevalent sensory impairment in the elderly. ARHI is a complex disease caused by an interaction between environmental and genetic factors. Here we describe the results of the first whole genome association study for ARHI. The study was performed using 846 cases and 846 controls selected from 3434 individuals collected by eight centers in six European countries. DNA pools for cases and controls were allelotyped on the Affymetrix 500K GeneChip for each center separately. The 252 top-ranked single nucleotide polymorphisms (SNPs) identified in a non-Finnish European sample group (1332 samples) and the 177 top-ranked SNPs from a Finnish sample group (360 samples) were confirmed using individual genotyping. Subsequently, the 23 most interesting SNPs were individually genotyped in an independent European replication group (138 samples). This resulted in the identification of a highly significant and replicated SNP located in GRM7, the gene encoding metabotropic glutamate receptor type 7. Also in the Finnish sample group, two GRM7 SNPs were significant, albeit in a different region of the gene. As the Finnish are genetically distinct from the rest of the European population, this may be due to allelic heterogeneity. We performed histochemical studies in human and mouse and showed that mGluR7 is expressed in hair cells and in spiral ganglion cells of the inner ear. Together these data indicate that common alleles of GRM7 contribute to an individual's risk of developing ARHI, possibly through a mechanism of altered susceptibility to glutamate excitotoxicity.

846 European ancestry cases, 846 European ancestry controls

Chapter III

Study Statistics

Key metrics and study information

1822
Total Participants
GWAS
Study Type
Yes
Replicated
63 European ancestry cases, 67 European ancestry controls
Replication Participants
European
Ancestry
Finland, Italy, Netherlands, Belgium, Germany
Recruitment Country
Chapter IV

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