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GWAS Study

Genome-wide association study of young-onset hypertension in the Han Chinese population of Taiwan.

Yang HC, Liang YJ, Wu YL et al.

19421330 PubMed ID
GWAS Study Type
2016 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

YH
Yang HC
LY
Liang YJ
WY
Wu YL
CC
Chung CM
CK
Chiang KM
HH
Ho HY
TC
Ting CT
LT
Lin TH
SS
Sheu SH
TW
Tsai WC
CJ
Chen JH
LH
Leu HB
YW
Yin WH
CT
Chiu TY
CC
Chen CI
FC
Fann CS
WJ
Wu JY
LT
Lin TN
LS
Lin SJ
CY
Chen YT
CJ
Chen JW
PW
Pan WH
Chapter II

Abstract

Summary of the research findings

Young-onset hypertension has a stronger genetic component than late-onset counterpart; thus, the identification of genes related to its susceptibility is a critical issue for the prevention and management of this disease. We carried out a two-stage association scan to map young-onset hypertension susceptibility genes. The first-stage analysis, a genome-wide association study, analyzed 175 matched case-control pairs; the second-stage analysis, a confirmatory association study, verified the results at the first stage based on a total of 1,008 patients and 1,008 controls. Single-locus association tests, multilocus association tests and pair-wise gene-gene interaction tests were performed to identify young-onset hypertension susceptibility genes. After considering stringent adjustments of multiple testing, gene annotation and single-nucleotide polymorphism (SNP) quality, four SNPs from two SNP triplets with strong association signals (-log(10)(p)>7) and 13 SNPs from 8 interactive SNP pairs with strong interactive signals (-log(10)(p)>8) were carefully re-examined. The confirmatory study verified the association for a SNP quartet 219 kb and 495 kb downstream of LOC344371 (a hypothetical gene) and RASGRP3 on chromosome 2p22.3, respectively. The latter has been implicated in the abnormal vascular responsiveness to endothelin-1 and angiotensin II in diabetic-hypertensive rats. Intrinsic synergy involving IMPG1 on chromosome 6q14.2-q15 was also verified. IMPG1 encodes interphotoreceptor matrix proteoglycan 1 which has cation binding capacity. The genes are novel hypertension targets identified in this first genome-wide hypertension association study of the Han Chinese population.

175 Han Chinese ancestry cases, 175 Han Chinese ancestry controls

Chapter III

Study Statistics

Key metrics and study information

2016
Total Participants
GWAS
Study Type
Yes
Replicated
833 Han Chinese ancestry cases, 833 Han Chinese ancestry controls
Replication Participants
East Asian
Ancestry
China
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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