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GWAS Study

Genome-wide association analysis identifies three psoriasis susceptibility loci.

Stuart PE, Nair RP, Ellinghaus E et al.

20953189 PubMed ID
GWAS Study Type
13126 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

SP
Stuart PE
NR
Nair RP
EE
Ellinghaus E
DJ
Ding J
TT
Tejasvi T
GJ
Gudjonsson JE
LY
Li Y
WS
Weidinger S
EB
Eberlein B
GC
Gieger C
WH
Wichmann HE
KM
Kunz M
IR
Ike R
KG
Krueger GG
BA
Bowcock AM
MU
Mrowietz U
LH
Lim HW
VJ
Voorhees JJ
AG
Abecasis GR
WM
Weichenthal M
FA
Franke A
RP
Rahman P
GD
Gladman DD
EJ
Elder JT
Chapter II

Abstract

Summary of the research findings

We carried out a meta-analysis of two recent psoriasis genome-wide association studies with a combined discovery sample of 1,831 affected individuals (cases) and 2,546 controls. One hundred and two loci selected based on P value rankings were followed up in a three-stage replication study including 4,064 cases and 4,685 controls from Michigan, Toronto, Newfoundland and Germany. In the combined meta-analysis, we identified three new susceptibility loci, including one at NOS2 (rs4795067, combined P = 4 × 10⁻¹¹), one at FBXL19 (rs10782001, combined P = 9 × 10⁻¹⁰) and one near PSMA6-NFKBIA (rs12586317, combined P = 2 × 10⁻⁸). All three loci were also associated with psoriatic arthritis (rs4795067, combined P = 1 × 10⁻⁵; rs10782001, combined P = 4 × 10⁻⁸; and rs12586317, combined P = 6 × 1⁻⁵) and purely cutaneous psoriasis (rs4795067, combined P = 1 × 10⁻⁸; rs10782001, combined P = 2 × 10⁻⁶; and rs12586317, combined P = 1 × 10⁻⁶). We also replicated a recently identified association signal near RNF114 (rs495337, combined P = 2 × 10⁻⁷).

Up to 1,831 cases, up to 2,546 controls

Chapter III

Study Statistics

Key metrics and study information

13126
Total Participants
GWAS
Study Type
Yes
Replicated
Up to 4,064 cases, up to 4,685 controls
Replication Participants
U.S., Canada, Germany
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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Analysis In Progress

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