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GWAS Study

Novel gene variants predict serum levels of the cytokines IL-18 and IL-1ra in older adults.

Matteini AM, Li J, Lange EM et al.

24182552 PubMed ID
GWAS Study Type
4443 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

MA
Matteini AM
LJ
Li J
LE
Lange EM
TT
Tanaka T
LL
Lange LA
TR
Tracy RP
WY
Wang Y
BM
Biggs ML
AD
Arking DE
FM
Fallin MD
CA
Chakravarti A
PB
Psaty BM
BS
Bandinelli S
FL
Ferrucci L
RA
Reiner AP
WJ
Walston JD
Chapter II

Abstract

Summary of the research findings

Activation of inflammatory pathways measured by serum inflammatory markers such as interleukin-18 (IL-18) and interleukin-1 receptor antagonist (IL-1ra) is strongly associated with the progression of chronic disease states in older adults. Given that these serum cytokine levels are in part a heritable trait, genetic variation may predict increased serum levels. Using the Cardiovascular Health Study and InCHIANTI cohorts, a genome-wide association study was performed to identify genetic variants that influence IL-18 and IL-1ra serum levels among older adults. Multiple linear regression models characterized the association between each SNP and log-transformed cytokine values. Tests for multiple independent signals within statistically significant loci were performed using haplotype analysis and regression models conditional on lead SNP in each region. Multiple SNPs were associated with these cytokines with genome-wide significance, including SNPs in the IL-18-BCO gene region of chromosome 2 for IL-18 (top SNP rs2250417, P=1.9×10(-32)) and in the IL-1 gene family region of chromosome 2 for IL-1ra (rs6743376, P=2.3×10(-26)). Haplotype tests and conditional linear regression models showed evidence of multiple independent signals in these regions. Serum IL-18 levels were also associated with a region on chromosome 2 containing the NLRC4 gene (rs12989936, P=2.7×10(-19)). These data characterize multiple robust genetic signals that influence IL-18 and IL-1ra cytokine production. In particular, the signal for serum IL-18 located on chromosome two is novel and potentially important in inflammasome triggered chronic activation of inflammation in older adults. Replication in independent cohorts is an important next step, as well as molecular studies to better understand the role of NLRC4.

4,443 European ancestry older adult individuals

Chapter III

Study Statistics

Key metrics and study information

4443
Total Participants
GWAS
Study Type
No
Replicated
European
Ancestry
U.S., Italy
Recruitment Country
Chapter IV

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