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GWAS Study

Multiple nonglycemic genomic loci are newly associated with blood level of glycated hemoglobin in East Asians.

Chen P, Takeuchi F, Lee JY et al.

24647736 PubMed ID
GWAS Study Type
32602 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

CP
Chen P
TF
Takeuchi F
LJ
Lee JY
LH
Li H
WJ
Wu JY
LJ
Liang J
LJ
Long J
TY
Tabara Y
GM
Goodarzi MO
PM
Pereira MA
KY
Kim YJ
GM
Go MJ
SD
Stram DO
VE
Vithana E
KC
Khor CC
LJ
Liu J
LJ
Liao J
YX
Ye X
WY
Wang Y
LL
Lu L
YT
Young TL
LJ
Lee J
TA
Thai AC
CC
Cheng CY
VD
van Dam RM
FY
Friedlander Y
HC
Heng CK
KW
Koh WP
CC
Chen CH
CL
Chang LC
PW
Pan WH
QQ
Qi Q
IM
Isono M
ZW
Zheng W
CQ
Cai Q
GY
Gao Y
YK
Yamamoto K
OK
Ohnaka K
TR
Takayanagi R
KY
Kita Y
UH
Ueshima H
HC
Hsiung CA
CJ
Cui J
SW
Sheu WH
RJ
Rotter JI
CY
Chen YD
HC
Hsu C
OY
Okada Y
KM
Kubo M
TA
Takahashi A
TT
Tanaka T
VR
van Rooij FJ
GS
Ganesh SK
HJ
Huang J
HT
Huang T
YJ
Yuan J
HJ
Hwang JY
GM
Gross MD
AT
Assimes TL
MT
Miki T
SX
Shu XO
QL
Qi L
CY
Chen YT
LX
Lin X
AT
Aung T
WT
Wong TY
TY
Teo YY
KB
Kim BJ
KN
Kato N
TE
Tai ES
Chapter II

Abstract

Summary of the research findings

Glycated hemoglobin A1c (HbA1c) is used as a measure of glycemic control and also as a diagnostic criterion for diabetes. To discover novel loci harboring common variants associated with HbA1c in East Asians, we conducted a meta-analysis of 13 genome-wide association studies (GWAS; N = 21,026). We replicated our findings in three additional studies comprising 11,576 individuals of East Asian ancestry. Ten variants showed associations that reached genome-wide significance in the discovery data set, of which nine (four novel variants at TMEM79 [P value = 1.3 × 10(-23)], HBS1L/MYB [8.5 × 10(-15)], MYO9B [9.0 × 10(-12)], and CYBA [1.1 × 10(-8)] as well as five variants at loci that had been previously identified [CDKAL1, G6PC2/ABCB11, GCK, ANK1, and FN3KI]) showed consistent evidence of association in replication data sets. These variants explained 1.76% of the variance in HbA1c. Several of these variants (TMEM79, HBS1L/MYB, CYBA, MYO9B, ANK1, and FN3K) showed no association with either blood glucose or type 2 diabetes. Among individuals with nondiabetic levels of fasting glucose (<7.0 mmol/L) but elevated HbA1c (≥6.5%), 36.1% had HbA1c <6.5% after adjustment for these six variants. Our East Asian GWAS meta-analysis has identified novel variants associated with HbA1c as well as demonstrated that the effects of known variants are largely transferable across ethnic groups. Variants affecting erythrocyte parameters rather than glucose metabolism may be relevant to the use of HbA1c for diagnosing diabetes in these populations.

17,290 East Asian ancestry individuals, 1,727 Malay ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

32602
Total Participants
GWAS
Study Type
Yes
Replicated
up to 13,585 East Asian ancestry individuals
Replication Participants
East Asian, South East Asian
Ancestry
U.S., China, Japan, Republic of Korea, Singapore
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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Analysis In Progress

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