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GWAS Study

Common variants in the CRP promoter are associated with a high C-reactive protein level in Kawasaki disease.

Kim JJ, Yun SW, Yu JJ et al.

25266886 PubMed ID
GWAS Study Type
651 Participants
102 Views
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

KJ
Kim JJ
YS
Yun SW
YJ
Yu JJ
YK
Yoon KL
LK
Lee KY
KH
Kil HR
KG
Kim GB
HM
Han MK
SM
Song MS
LH
Lee HD
BJ
Byeon JH
SS
Sohn S
HY
Hong YM
JG
Jang GY
LJ
Lee JK
Chapter II

Abstract

Summary of the research findings

Kawasaki disease (KD) is an acute self-limiting form of vasculitis that afflicts infants and children and manifests as fever and signs of mucocutaneous inflammation. Children with KD show various laboratory inflammatory abnormalities, such as elevations in their white blood cell (WBC) count, C-reactive protein (CRP) level, and erythrocyte sedimentation rate (ESR). We here performed a genome-wide association study (GWAS) of 178 KD patients to identify the genetic loci that influence 10 important KD laboratory markers: WBC count, neutrophil count, platelet count, CRP, ESR, hemoglobin, aspartate aminotransferase (AST), alanine aminotransferase (ALT), albumin, and total protein. A total of 165 loci passed our arbitrary stage 1 threshold for replication (p < 1 × 10(-5)). Of these, only 2 SNPs (rs12068753 and rs4786091) demonstrated a significant association with the CRP level in replication study of 473 KD patients (p < 0.05). The SNP located at the CRP locus (rs12068753) demonstrated the most significant association with CRP in KD patients (beta = 4.73 and p = 1.20 × 10(-6) according to the stage 1 GWAS; beta = 3.65 and p = 1.35 × 10(-8) according to the replication study; beta = 3.97 and p = 1.11 × 10(-13) according to combined analysis) and explained 8.1% of the phenotypic variation observed. However, this SNP did not demonstrate any significant association with CRP in the general population (beta = 0.37 and p = 0.1732) and only explained 0.1% of the phenotypic variation in this instance. Furthermore, rs12068753 did not affect the development of coronary artery lesions or intravenous immunoglobulin resistance in KD patients. These results indicate that common variants in the CRP promoter can play an important role in the CRP levels in KD.

178 Korean ancestry cases

Chapter III

Study Statistics

Key metrics and study information

651
Total Participants
GWAS
Study Type
Yes
Replicated
473 Korean ancestry cases
Replication Participants
East Asian
Ancestry
Republic of Korea
Recruitment Country
Chapter IV

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