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GWAS Study

Genome-wide meta-analysis identifies five new susceptibility loci for cutaneous malignant melanoma.

Law MH, Bishop DT, Lee JE et al.

26237428 PubMed ID
GWAS Study Type
42399 Participants
67 Views
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

LM
Law MH
BD
Bishop DT
LJ
Lee JE
BM
Brossard M
MN
Martin NG
ME
Moses EK
SF
Song F
BJ
Barrett JH
KR
Kumar R
ED
Easton DF
PP
Pharoah PDP
SA
Swerdlow AJ
KK
Kypreou KP
TJ
Taylor JC
HM
Harland M
RJ
Randerson-Moor J
AL
Akslen LA
AP
Andresen PA
AM
Avril MF
AE
Azizi E
SG
Scarrà GB
BK
Brown KM
DT
Dębniak T
DD
Duffy DL
ED
Elder DE
FS
Fang S
FE
Friedman E
GP
Galan P
GP
Ghiorzo P
GE
Gillanders EM
GA
Goldstein AM
GN
Gruis NA
HJ
Hansson J
HP
Helsing P
HM
Hočevar M
HV
Höiom V
IC
Ingvar C
KP
Kanetsky PA
CW
Chen WV
LM
Landi MT
LJ
Lang J
LG
Lathrop GM
LJ
Lubiński J
MR
Mackie RM
MG
Mann GJ
MA
Molven A
MG
Montgomery GW
NS
Novaković S
OH
Olsson H
PS
Puig S
PJ
Puig-Butille JA
QA
Qureshi AA
RG
Radford-Smith GL
VD
van der Stoep N
VD
van Doorn R
WD
Whiteman DC
CJ
Craig JE
SD
Schadendorf D
SL
Simms LA
BK
Burdon KP
ND
Nyholt DR
PK
Pooley KA
ON
Orr N
SA
Stratigos AJ
CA
Cust AE
WS
Ward SV
HN
Hayward NK
HJ
Han J
SH
Schulze HJ
DA
Dunning AM
BJ
Bishop JAN
DF
Demenais F
AC
Amos CI
MS
MacGregor S
IM
Iles MM
Chapter II

Abstract

Summary of the research findings

Thirteen common susceptibility loci have been reproducibly associated with cutaneous malignant melanoma (CMM). We report the results of an international 2-stage meta-analysis of CMM genome-wide association studies (GWAS). This meta-analysis combines 11 GWAS (5 previously unpublished) and a further three stage 2 data sets, totaling 15,990 CMM cases and 26,409 controls. Five loci not previously associated with CMM risk reached genome-wide significance (P < 5 × 10(-8)), as did 2 previously reported but unreplicated loci and all 13 established loci. Newly associated SNPs fall within putative melanocyte regulatory elements, and bioinformatic and expression quantitative trait locus (eQTL) data highlight candidate genes in the associated regions, including one involved in telomere biology.

12,874 European ancestry cases, 23,203 European ancestry controls

Chapter III

Study Statistics

Key metrics and study information

42399
Total Participants
GWAS
Study Type
Yes
Replicated
785 European ancestry cases, 791 European ancestry controls, 2,331 cases, 2,415 controls
Replication Participants
European
Ancestry
U.K., Greece, U.S., Israel, Australia, Germany, France
Recruitment Country
Chapter IV

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