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GWAS Study

Genome-wide Association Study of Platelet Count Identifies Ancestry-Specific Loci in Hispanic/Latino Americans.

Schick UM, Jain D, Hodonsky CJ et al.

26805783 PubMed ID
GWAS Study Type
19661 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

SU
Schick UM
JD
Jain D
HC
Hodonsky CJ
MJ
Morrison JV
DJ
Davis JP
BL
Brown L
ST
Sofer T
CM
Conomos MP
SC
Schurmann C
MC
McHugh CP
NS
Nelson SC
VS
Vadlamudi S
SA
Stilp A
PA
Plantinga A
BL
Baier L
BS
Bien SA
GS
Gogarten SM
LC
Laurie CA
TK
Taylor KD
LY
Liu Y
AP
Auer PL
FN
Franceschini N
SA
Szpiro A
RK
Rice K
KK
Kerr KF
RJ
Rotter JI
HR
Hanson RL
PG
Papanicolaou G
RS
Rich SS
LR
Loos RJ
BB
Browning BL
BS
Browning SR
WB
Weir BS
LC
Laurie CC
MK
Mohlke KL
NK
North KE
TT
Thornton TA
RA
Reiner AP
Chapter II

Abstract

Summary of the research findings

Platelets play an essential role in hemostasis and thrombosis. We performed a genome-wide association study of platelet count in 12,491 participants of the Hispanic Community Health Study/Study of Latinos by using a mixed-model method that accounts for admixture and family relationships. We discovered and replicated associations with five genes (ACTN1, ETV7, GABBR1-MOG, MEF2C, and ZBTB9-BAK1). Our strongest association was with Amerindian-specific variant rs117672662 (p value = 1.16 × 10(-28)) in ACTN1, a gene implicated in congenital macrothrombocytopenia. rs117672662 exhibited allelic differences in transcriptional activity and protein binding in hematopoietic cells. Our results underscore the value of diverse populations to extend insights into the allelic architecture of complex traits.

12,491 Hispanic/Latin American individuals

Chapter III

Study Statistics

Key metrics and study information

19661
Total Participants
GWAS
Study Type
Yes
Replicated
7,170 Hispanic/Latin American individuals
Replication Participants
Hispanic or Latin American
Ancestry
U.S.
Recruitment Country
Chapter IV

AI-Generated Summary

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