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GWAS Study

Identification of genetic susceptibility loci for intestinal Behçet's disease.

Kim SW, Jung YS, Ahn JB et al.

28045058 PubMed ID
GWAS Study Type
1521 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

KS
Kim SW
JY
Jung YS
AJ
Ahn JB
SE
Shin ES
JH
Jang HW
LH
Lee HJ
IK
Il Kim T
KD
Kim DY
BD
Bang D
KW
Kim WH
CJ
Cheon JH
Chapter II

Abstract

Summary of the research findings

Several recent genome-wide association studies (GWAS) identified susceptibility loci/genes for Behçet's disease (BD). However, no study has specifically investigated the genetic susceptibility loci associated with intestinal involvement in BD. We aimed to identify distinctive genetic susceptibility loci/genes associated with intestinal involvement in BD and determine their roles in intestinal inflammation as well as their interactions with genes involved in inflammatory bowel disease (IBD). GWAS and validation studies showed intestinal BD-specific associations with an NAALADL2 gene locus (rs3914501, P = 3.8 × 10-4) and a YIPF7 gene locus (rs6838327, P = 3.5 × 10-4). Validation, haplotype, and pathway analyses showed distinct genetic architectures between intestinal BD and BD without intestinal involvement. Furthermore, network analysis revealed shared pathogenic pathways between intestinal BD and IBD. Gene functional analyses indicated that down-regulation of NAALADL2 and YIPF7 expression was associated with exacerbating intestinal inflammatory responses both in vitro and in vivo. Our results provide new insights into intestinal BD-specific genetic variations, which represents a distinct pathway from BD without intestinal involvement. Functional consequences of the intestinal BD-specific NAALADL2 and YIPF7 expression patterns proved a suggestive association with intestinal inflammation risk, which warrants further validation.

99 Korean ancestry cases with intestinal involvement, 100 Korean ancestry cases without intestinal involvement, 597 Korean ancestry controls.

Chapter III

Study Statistics

Key metrics and study information

1521
Total Participants
GWAS
Study Type
Yes
Replicated
196 Korean ancestry cases with intestinal involvement, 138 Korean ancestry cases without intestinal involvement, 391 Korean ancestry controls.
Replication Participants
East Asian
Ancestry
Republic of Korea
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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