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GWAS Study

Sex specific associations in genome wide association analysis of renal cell carcinoma.

Laskar RS, Muller DC, Li P et al.

31231134 PubMed ID
GWAS Study Type
8061 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

LR
Laskar RS
MD
Muller DC
LP
Li P
MM
Machiela MJ
YY
Ye Y
GV
Gaborieau V
FM
Foll M
HJ
Hofmann JN
CL
Colli L
SJ
Sampson JN
WZ
Wang Z
BD
Bacq-Daian D
BA
Boland A
AB
Abedi-Ardekani B
DG
Durand G
LC
Le Calvez-Kelm F
RN
Robinot N
BH
Blanche H
PE
Prokhortchouk E
SK
Skryabin KG
BL
Burdett L
YM
Yeager M
RS
Radojevic-Skodric S
SS
Savic S
FL
Foretova L
HI
Holcatova I
JV
Janout V
MD
Mates D
RS
Rascu S
MA
Mukeria A
ZD
Zaridze D
BV
Bencko V
CC
Cybulski C
FE
Fabianova E
JV
Jinga V
LJ
Lissowska J
LJ
Lubinski J
NM
Navratilova M
RP
Rudnai P
ŚB
Świątkowska B
BS
Benhamou S
CG
Cancel-Tassin G
CO
Cussenot O
TA
Trichopoulou A
RE
Riboli E
OK
Overvad K
PS
Panico S
LB
Ljungberg B
SR
Sitaram RT
GG
Giles GG
MR
Milne RL
SG
Severi G
BF
Bruinsma F
FT
Fletcher T
KK
Koppova K
LS
Larsson SC
WA
Wolk A
BR
Banks RE
SP
Selby PJ
ED
Easton DF
PP
Pharoah P
AG
Andreotti G
BF
Beane Freeman LE
KS
Koutros S
AD
Albanes D
MS
Männistö S
WS
Weinstein S
CP
Clark PE
ET
Edwards TL
LL
Lipworth L
CH
Carol H
FM
Freedman ML
PM
Pomerantz MM
CE
Cho E
KP
Kraft P
PM
Preston MA
WK
Wilson KM
MG
Michael Gaziano J
SH
Sesso HD
BA
Black A
FN
Freedman ND
HW
Huang WY
AJ
Anema JG
KR
Kahnoski RJ
LB
Lane BR
NS
Noyes SL
PD
Petillo D
TB
Teh BT
PU
Peters U
WE
White E
AG
Anderson GL
JL
Johnson L
LJ
Luo J
CW
Chow WH
ML
Moore LE
CT
Choueiri TK
WC
Wood C
JM
Johansson M
MJ
McKay JD
BK
Brown KM
RN
Rothman N
LM
Lathrop MG
DJ
Deleuze JF
WX
Wu X
BP
Brennan P
CS
Chanock SJ
PM
Purdue MP
SG
Scelo G
Chapter II

Abstract

Summary of the research findings

Renal cell carcinoma (RCC) has an undisputed genetic component and a stable 2:1 male to female sex ratio in its incidence across populations, suggesting possible sexual dimorphism in its genetic susceptibility. We conducted the first sex-specific genome-wide association analysis of RCC for men (3227 cases, 4916 controls) and women (1992 cases, 3095 controls) of European ancestry from two RCC genome-wide scans and replicated the top findings using an additional series of men (2261 cases, 5852 controls) and women (1399 cases, 1575 controls) from two independent cohorts of European origin. Our study confirmed sex-specific associations for two known RCC risk loci at 14q24.2 (DPF3) and 2p21(EPAS1). We also identified two additional suggestive male-specific loci at 6q24.3 (SAMD5, male odds ratio (ORmale) = 0.83 [95% CI = 0.78-0.89], Pmale = 1.71 × 10-8 compared with female odds ratio (ORfemale) = 0.98 [95% CI = 0.90-1.07], Pfemale = 0.68) and 12q23.3 (intergenic, ORmale = 0.75 [95% CI = 0.68-0.83], Pmale = 1.59 × 10-8 compared with ORfemale = 0.93 [95% CI = 0.82-1.06], Pfemale = 0.21) that attained genome-wide significance in the joint meta-analysis. Herein, we provide evidence of sex-specific associations in RCC genetic susceptibility and advocate the necessity of larger genetic and genomic studies to unravel the endogenous causes of sex bias in sexually dimorphic traits and diseases like RCC.

1,992 European ancestry female cases, 3,095 European ancestry female controls

Chapter III

Study Statistics

Key metrics and study information

8061
Total Participants
GWAS
Study Type
Yes
Replicated
1,399 European ancestry female cases, 1,575 European ancestry female controls
Replication Participants
European
Ancestry
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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Analysis In Progress

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