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GWAS Study

Genetic control of CCL24, POR, and IL23R contributes to the pathogenesis of sarcoidosis.

Meguro A, Ishihara M, Petrek M et al.

32826979 PubMed ID
GWAS Study Type
3989 Participants
39 Views
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

MA
Meguro A
IM
Ishihara M
PM
Petrek M
YK
Yamamoto K
TM
Takeuchi M
MF
Mrazek F
KV
Kolek V
BA
Benicka A
YT
Yamane T
SE
Shibuya E
YA
Yoshino A
IA
Isomoto A
OM
Ota M
YK
Yatsu K
SN
Shijubo N
NS
Nagai S
YE
Yamaguchi E
YT
Yamaguchi T
NK
Namba K
KT
Kaburaki T
TH
Takase H
MS
Morimoto SI
HJ
Hori J
KK
Kono K
GH
Goto H
ST
Suda T
IS
Ikushima S
AY
Ando Y
TS
Takenaka S
TM
Takeuchi M
YT
Yuasa T
SK
Sugisaki K
ON
Ohguro N
HM
Hiraoka M
KN
Kitaichi N
SY
Sugiyama Y
HN
Horita N
AY
Asukata Y
KT
Kawagoe T
KI
Kimura I
IM
Ishido M
IH
Inoko H
MM
Mochizuki M
OS
Ohno S
BS
Bahram S
RE
Remmers EF
KD
Kastner DL
MN
Mizuki N
Chapter II

Abstract

Summary of the research findings

Sarcoidosis is a genetically complex systemic inflammatory disease that affects multiple organs. We present a GWAS of a Japanese cohort (700 sarcoidosis cases and 886 controls) with replication in independent samples from Japan (931 cases and 1,042 controls) and the Czech Republic (265 cases and 264 controls). We identified three loci outside the HLA complex, CCL24, STYXL1-SRRM3, and C1orf141-IL23R, which showed genome-wide significant associations (P < 5.0 × 10-8) with sarcoidosis; CCL24 and STYXL1-SRRM3 were novel. The disease-risk alleles in CCL24 and IL23R were associated with reduced CCL24 and IL23R expression, respectively. The disease-risk allele in STYXL1-SRRM3 was associated with elevated POR expression. These results suggest that genetic control of CCL24, POR, and IL23R expression contribute to the pathogenesis of sarcoidosis. We speculate that the CCL24 risk allele might be involved in a polarized Th1 response in sarcoidosis, and that POR and IL23R risk alleles may lead to diminished host defense against sarcoidosis pathogens.

685 Japanese ancestry cases, 847 Japanese ancestry controls

Chapter III

Study Statistics

Key metrics and study information

3989
Total Participants
GWAS
Study Type
Yes
Replicated
907 Japanese ancestry cases, 252 European ancestry cases, 1,042 Japanese ancestry controls, 256 European ancestry controls
Replication Participants
East Asian, European
Ancestry
Japan, Czech Republic
Recruitment Country
Chapter IV

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