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GWAS Study

Genome-wide Association Study Identified Chromosome 8 Locus Associated with Medication-related Osteonecrosis of the Jaw.

Yang G, Singh S, McDonough CW et al.

34390503 PubMed ID
GWAS Study Type
3639 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

YG
Yang G
SS
Singh S
MC
McDonough CW
LJ
Lamba JK
HI
Hamadeh I
HL
Holliday LS
WD
Wang D
KJ
Katz J
LP
Lakatos PA
BB
Balla B
KJ
Kosa JP
PG
Pelliccioni GA
PD
Price DK
VD
Van Driest SL
FW
Figg WD
LT
Langaee T
MJ
Moreb JS
GY
Gong Y
Chapter II

Abstract

Summary of the research findings

Medication-related osteonecrosis of the jaw (MRONJ) is a rare but serious drug-related adverse event. To identify pharmacogenomic markers of MRONJ associated with bisphosphonate therapy, we conducted a genomewide association study (GWAS) meta-analysis followed by functional analysis of 5,008 individuals of European ancestry treated with bisphosphonates, which includes the largest number of MRONJ cases to date (444 cases and 4,564 controls). Discovery GWAS was performed in randomly selected 70% of the patients with cancer and replication GWAS was performed in the remaining 30% of the patients with cancer treated with intravenous bisphosphonates followed by meta-analysis of all 3,639 patients with cancer. GWAS was also performed in 1,369 patients with osteoporosis treated with oral bisphosphonates. The lead single-nucleotide polymorphism (SNP), rs2736308 on chromosome 8, was associated with an increased risk of MRONJ with an odds ratio (OR) of 2.71 and 95% confidence interval (CI) of 1.90-3.86 (P = 3.57*10-8 ) in the meta-analysis of patients with cancer. This SNP was validated in the MRONJ GWAS in patients with osteoporosis (OR: 2.82, 95% CI: 1.55-4.09, P = 6.84*10-4 ). The meta-analysis combining patients with cancer and patients with osteoporosis yielded the same lead SNP rs2736308 on chromosome 8 as the top SNP (OR: 2.74, 95% CI: 2.09-3.39, P = 9.65*10-11 ). This locus is associated with regulation of the BLK, CTSB, and FDFT1 genes, which had been associated with bone mineral density. FDFT1 encodes a membrane-associated enzyme, which is implicated in the bisphosphonate pathway. This study provides insights into the potential mechanism of MRONJ.

217 European ancestry cases, 2,208 European ancestry controls

Chapter III

Study Statistics

Key metrics and study information

3639
Total Participants
GWAS
Study Type
Yes
Replicated
109 European ancestry cases, 1,105 European ancestry controls
Replication Participants
European
Ancestry
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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