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A high-coverage Neandertal genome from Vindija Cave in Croatia

Prüfer K, de Filippo C, Grote S et al.

28982794 PubMed ID
36 Authors
11/03/2017 Published
5 Samples
206 Views
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

PK
Prüfer K
DF
de Filippo C
GS
Grote S
MF
Mafessoni F
KP
Korlević P
HM
Hajdinjak M
VB
Vernot B
SL
Skov L
HP
Hsieh P
PS
Peyrégne S
RD
Reher D
HC
Hopfe C
NS
Nagel S
MT
Maricic T
FQ
Fu Q
TC
Theunert C
RR
Rogers R
SP
Skoglund P
CM
Chintalapati M
DM
Dannemann M
NB
Nelson BJ
KF
Key FM
RP
Rudan P
Kućan Ž
GI
Gušić I
GL
Golovanova LV
DV
Doronichev VB
PN
Patterson N
RD
Reich D
EE
Eichler EE
SM
Slatkin M
SM
Schierup MH
AA
Andrés AM
KJ
Kelso J
MM
Meyer M
PS
Pääbo S
Chapter II

Abstract

Summary of the research findings

To date, the only Neandertal genome that has been sequenced to high quality is from an individual found in Southern Siberia. We sequenced the genome of a female Neandertal from ~50,000 years ago from Vindija Cave, Croatia, to ~30-fold genomic coverage. She carried 1.6 differences per 10,000 base pairs between the two copies of her genome, fewer than present-day humans, suggesting that Neandertal populations were of small size. Our analyses indicate that she was more closely related to the Neandertals that mixed with the ancestors of present-day humans living outside of sub-Saharan Africa than the previously sequenced Neandertal from Siberia, allowing 10 to 20% more Neandertal DNA to be identified in present-day humans, including variants involved in low-density lipoprotein cholesterol concentrations, schizophrenia, and other diseases.

Chapter III

Ancient DNA Samples

5 ancient DNA samples referenced in this publication

5 Samples
Sample ID Date/Era Country Locality Sex mtDNA Y-DNA
Vindija 43500 BCE Croatia Vindija Cave F ND1b1a1b1
I0001 6221 BCE Luxembourg Echternach M U5b1a I-V4921
Altai 128050 BCE Russia Denisova Cave. Altai F ND1a
Denisova 74250 BCE Russia Denisova Cave. Altai F DN1a1
Ust_Ishim 43980 BCE Russia Ust'-Ishim. Siberia M R* K-M2308
Chapter IV

AI-Generated Summary

AI-generated by DNAGENICS

Independent AI summary of ancestry and genetic findings from the published study

Important: This summary is AI-generated by DNAGENICS for informational purposes only. It was not created by, affiliated with, or endorsed by the researchers behind the original publication, and is based solely on that published research. It may contain errors or omissions. DNAGENICS disclaims all liability for any inaccuracies or consequences arising from use of this information. Verify all information against the original publication. This is not professional scientific review or medical advice.

Summary

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