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GWAS Study

New loci and coding variants confer risk for age-related macular degeneration in East Asians.

Cheng CY, Yamashiro K, Chen LJ et al.

25629512 PubMed ID
GWAS Study Type
22325 Participants
131 Views
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

CC
Cheng CY
YK
Yamashiro K
CL
Chen LJ
AJ
Ahn J
HL
Huang L
HL
Huang L
CC
Cheung CM
MM
Miyake M
CP
Cackett PD
YI
Yeo IY
LA
Laude A
MR
Mathur R
PJ
Pang J
SK
Sim KS
KA
Koh AH
CP
Chen P
LS
Lee SY
WD
Wong D
CC
Chan CM
LB
Loh BK
SY
Sun Y
DS
Davila S
NI
Nakata I
NH
Nakanishi H
AY
Akagi-Kurashige Y
GN
Gotoh N
TA
Tsujikawa A
MF
Matsuda F
MK
Mori K
YS
Yoneya S
SY
Sakurada Y
IH
Iijima H
IT
Iida T
HS
Honda S
LT
Lai TY
TP
Tam PO
CH
Chen H
TS
Tang S
DX
Ding X
WF
Wen F
LF
Lu F
ZX
Zhang X
SY
Shi Y
ZP
Zhao P
ZB
Zhao B
SJ
Sang J
GB
Gong B
DR
Dorajoo R
YJ
Yuan JM
KW
Koh WP
VD
van Dam RM
FY
Friedlander Y
LY
Lin Y
HM
Hibberd ML
FJ
Foo JN
WN
Wang N
WC
Wong CH
TG
Tan GS
PS
Park SJ
BM
Bhargava M
GL
Gopal L
NT
Naing T
LJ
Liao J
OP
Ong PG
MP
Mitchell P
ZP
Zhou P
XX
Xie X
LJ
Liang J
MJ
Mei J
JX
Jin X
SS
Saw SM
OM
Ozaki M
MT
Mizoguchi T
KY
Kurimoto Y
WS
Woo SJ
CH
Chung H
YH
Yu HG
SJ
Shin JY
PD
Park DH
KI
Kim IT
CW
Chang W
SM
Sagong M
LS
Lee SJ
KH
Kim HW
LJ
Lee JE
LY
Li Y
LJ
Liu J
TY
Teo YY
HC
Heng CK
LT
Lim TH
YS
Yang SK
SK
Song K
VE
Vithana EN
AT
Aung T
BJ
Bei JX
ZY
Zeng YX
TE
Tai ES
LX
Li XX
YZ
Yang Z
PK
Park KH
PC
Pang CP
YN
Yoshimura N
WT
Wong TY
KC
Khor CC
Chapter II

Abstract

Summary of the research findings

Age-related macular degeneration (AMD) is a major cause of blindness, but presents differently in Europeans and Asians. Here, we perform a genome-wide and exome-wide association study on 2,119 patients with exudative AMD and 5,691 controls, with independent replication in 4,226 patients and 10,289 controls, all of East Asian descent, as part of The Genetics of AMD in Asians (GAMA) Consortium. We find a strong association between CETP Asp442Gly (rs2303790), an East Asian-specific mutation, and increased risk of AMD (odds ratio (OR)=1.70, P=5.60 × 10(-22)). The AMD risk allele (442Gly), known to protect from coronary heart disease, increases HDL cholesterol levels by 0.17 mmol l(-1) (P=5.82 × 10(-21)) in East Asians (n=7,102). We also identify three novel AMD loci: C6orf223 Ala231Ala (OR=0.78, P=6.19 × 10(-18)), SLC44A4 Asp47Val (OR=1.27, P=1.08 × 10(-11)) and FGD6 Gln257Arg (OR=0.87, P=2.85 × 10(-8)). Our findings suggest that some of the genetic loci conferring AMD susceptibility in East Asians are shared with Europeans, yet AMD in East Asians may also have a distinct genetic signature.

2,119 East Asian ancestry cases, 5,691 East Asian ancestry controls

Chapter III

Study Statistics

Key metrics and study information

22325
Total Participants
GWAS
Study Type
Yes
Replicated
4,226 East Asian ancestry cases, 10,289 East Asian ancestry controls
Replication Participants
East Asian
Ancestry
Republic of Korea, China, Japan, Singapore, Hong Kong SAR
Recruitment Country
Chapter IV

AI-Generated Summary

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