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GWAS Study

Genome-wide association study identifies 8p21.3 associated with persistent hepatitis B virus infection among Chinese.

Li Y, Si L, Zhai Y et al.

27244555 PubMed ID
GWAS Study Type
9569 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

LY
Li Y
SL
Si L
ZY
Zhai Y
HY
Hu Y
HZ
Hu Z
BJ
Bei JX
XB
Xie B
RQ
Ren Q
CP
Cao P
YF
Yang F
SQ
Song Q
BZ
Bao Z
ZH
Zhang H
HY
Han Y
WZ
Wang Z
CX
Chen X
XX
Xia X
YH
Yan H
WR
Wang R
ZY
Zhang Y
GC
Gao C
MJ
Meng J
TX
Tu X
LX
Liang X
CY
Cui Y
LY
Liu Y
WX
Wu X
LZ
Li Z
WH
Wang H
LZ
Li Z
HB
Hu B
HM
He M
GZ
Gao Z
XX
Xu X
JH
Ji H
YC
Yu C
SY
Sun Y
XB
Xing B
YX
Yang X
ZH
Zhang H
TA
Tan A
WC
Wu C
JW
Jia W
LS
Li S
ZY
Zeng YX
SH
Shen H
HF
He F
MZ
Mo Z
ZH
Zhang H
ZG
Zhou G
Chapter II

Abstract

Summary of the research findings

Hepatitis B virus (HBV) infection is a common infectious disease. Here we perform a genome-wide association study (GWAS) among Chinese populations to identify novel genetic loci involved in persistent HBV infection. GWAS scan is performed in 1,251 persistently HBV infected subjects (PIs, cases) and 1,057 spontaneously recovered subjects (SRs, controls), followed by replications in four independent populations totally consisting of 3,905 PIs and 3,356 SRs. We identify a novel locus at 8p21.3 (index rs7000921, odds ratio=0.78, P=3.2 × 10(-12)). Furthermore, we identify significant expression quantitative trait locus associations for INTS10 gene at 8p21.3. We demonstrate that INST10 suppresses HBV replication via IRF3 in liver cells. In clinical plasma samples, we confirm that INST10 levels are significantly decreased in PIs compared with SRs, and negatively correlated with the HBV load. These findings highlight a novel antiviral gene INTS10 at 8p21.3 in the clearance of HBV infection.

1,251 Chinese ancestry persistently infected cases, 1,057 Chinese ancestry spontaneously recovered controls

Chapter III

Study Statistics

Key metrics and study information

9569
Total Participants
GWAS
Study Type
Yes
Replicated
3,905 Chinese ancestry persistently infected cases, 3,356 Chinese ancestry spontaneously recovered controls
Replication Participants
East Asian
Ancestry
China
Recruitment Country
Chapter IV

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