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GWAS Study

Genome-wide association analyses identify two susceptibility loci for pachychoroid disease central serous chorioretinopathy.

Hosoda Y, Miyake M, Schellevis RL et al.

31872073 PubMed ID
GWAS Study Type
14575 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

HY
Hosoda Y
MM
Miyake M
SR
Schellevis RL
BC
Boon CJF
HC
Hoyng CB
MA
Miki A
MA
Meguro A
SY
Sakurada Y
YS
Yoneyama S
TY
Takasago Y
HM
Hata M
MY
Muraoka Y
NH
Nakanishi H
OA
Oishi A
OS
Ooto S
TH
Tamura H
UA
Uji A
MM
Miyata M
TA
Takahashi A
UN
Ueda-Arakawa N
TA
Tajima A
ST
Sato T
MN
Mizuki N
SC
Shiragami C
IT
Iida T
KC
Khor CC
WT
Wong TY
YR
Yamada R
HS
Honda S
DJ
de Jong EK
HA
Hollander AID
MF
Matsuda F
YK
Yamashiro K
TA
Tsujikawa A
Chapter II

Abstract

Summary of the research findings

The recently emerged pachychoroid concept has changed the understanding of age-related macular degeneration (AMD), which is a major cause of blindness; recent studies attributed AMD in part to pachychoroid disease central serous chorioretinopathy (CSC), suggesting the importance of elucidating the CSC pathogenesis. Our large genome-wide association study followed by validation studies in three independent Japanese and European cohorts, consisting of 1546 CSC samples and 13,029 controls, identified two novel CSC susceptibility loci: TNFRSF10A-LOC389641 and near GATA5 (rs13278062, odds ratio = 1.35, P = 1.26 × 10-13; rs6061548, odds ratio = 1.63, P = 5.36 × 10-15). A T allele at TNFRSF10A-LOC389641 rs13278062, a risk allele for CSC, is known to be a risk allele for AMD. This study not only identified new susceptibility genes for CSC, but also improves the understanding of the pathogenesis of AMD.

610 Japanese ancestry cases, 2,850 Japanese ancestry controls

Chapter III

Study Statistics

Key metrics and study information

14575
Total Participants
GWAS
Study Type
Yes
Replicated
415 Japanese ancestry cases, 6,602 Japanese ancestry controls, 521 European ancestry cases, 3,577 European ancestry controls
Replication Participants
East Asian, European
Ancestry
Japan
Recruitment Country
Chapter IV

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