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mtDNA Haplogroup • Maternal Lineage

A2M

mtDNA Haplogroup A2M

~6,000 years ago
Beringia / North America
0 subclades
2 ancient samples
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Chapter I

The Story

The journey of mtDNA haplogroup A2M

Origins and Evolution

mtDNA haplogroup A2M is a downstream branch of the Native American macro-lineage A2, specifically nested beneath the intermediate clade A2A48. Haplogroup A2 is one of the founding maternal lineages associated with the initial peopling of the Americas from Beringia during the Late Pleistocene. As an internal subclade, A2M most likely formed after the initial dispersal into the Americas, during the early to mid-Holocene, when regional diversification of maternal lineages increased as populations became more sedentary and regionally differentiated.

Because A2M is a derived branch of A2A48, its time depth is expected to be substantially younger than the basal A2 root (commonly estimated ~15–20 kya) and instead fits into a mid-Holocene timeframe. Exact dating requires targeted complete mitogenome sequencing of confirmed A2M samples and coalescent analysis; current placement is an informed estimate based on phylogenetic position and comparative divergence of similar A2 subclades.

Subclades

At present, A2M is characterized as an intermediate/terminal clade beneath A2A48 in available phylogenies. The internal structure (further named subclades under A2M) is either poorly sampled or not yet fully resolved in public databases. Additional full mitochondrial genome sequencing from diverse indigenous populations across the Americas is necessary to identify and validate any downstream sublineages and to refine the internal branching order and age estimates.

Geographical Distribution

Direct observations of A2M in published literature are limited, but reasonable population-genetic inference places this haplogroup primarily in indigenous North American and nearby Central American populations, with possible occurrences in parts of South America depending on historical migration and gene flow. The ancestral A2 lineage shows a trans-American distribution, and many A2 subclades have localized high frequencies (for example, some A2 branches are concentrated in the Pacific Northwest, the Andes, or Mesoamerica). A2M is therefore best understood as a regionally derived clade whose present-day distribution likely reflects Holocene demographic processes: founder effects, localized expansions, and drift in relatively small, often isolated populations.

Historical and Cultural Significance

Haplogroup A2 and its subclades are strongly associated with the founding populations of the Americas. While A2M itself does not currently have a specific, well-documented archaeological culture uniquely tied to it, as a Holocene-derived A2 branch it plausibly contributed maternally to communities involved in postglacial recolonization and later regional cultural developments. Potential cultural contexts where A2-derived maternal lineages were important include:

  • Early Paleoindian groups that established initial settlements in North America (context for the deeper A2 lineage).
  • Holocene Archaic and regionalized hunter-gatherer groups where local maternal lineages diversified.
  • Later coastal and inland Native American societies (including those of the Northwest Coast, Great Plains, and Mesoamerica), depending on the specific local frequency of A2M.

Because A2M is likely low-to-moderate frequency and under-sampled, attributing it to a single archaeological culture (e.g., Thule, Mississippian, or other named cultures) would be premature without more targeted ancient DNA or broad population sampling.

Conclusion

mtDNA haplogroup A2M represents a regional, derived maternal lineage within the Native American A2 clade, nested under A2A48. It most likely arose in the Holocene (several thousand years after the initial Late Pleistocene entry into the Americas) and is found among indigenous populations of North and Central (and possibly parts of South) America. The limited public data on A2M means its precise age, substructure, and fine-scale distribution remain to be clarified; full mitogenome sequencing from diverse populations and ancient remains will be essential to refine its phylogeny and historical inference. Researchers and community scientists are encouraged to report complete mtDNA sequences and associated metadata (with appropriate permissions) to improve the resolution of A2M's history.

Key Points

  • Origins and Evolution
  • Subclades
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 A2M Current ~6,000 years ago 🪨 Chalcolithic 6,000 years 0 0 2
2 A2A48 1 0 0
3 A2A ~12,000 years ago 🌾 Neolithic 12,000 years 26 284 58
4 A2 ~16,000 years ago 🏹 Mesolithic 16,000 years 8 778 14
5 AA1 14 828 0
6 AA 4 832 0
7 A ~30,000 years ago 🦴 Paleolithic 30,000 years 4 874 192
8 N ~60,000 years ago 🦴 Paleolithic 60,000 years 16 20,371 13
9 L3 ~70,000 years ago 🦴 Paleolithic 70,000 years 7 23,542 6
10 L3'4 2 23,581 0
11 L3'4'6 2 23,584 0
12 L2'3'4'6 2 24,475 0
13 L2'3'4'5'6'7 2 24,488 0
14 L1'2'3'4'5'6'7 2 24,903 0
15 L ~160,000 years ago 🦴 Paleolithic 160,000 years 2 25,205 5

Subclades (0)

Terminal branch - no known subclades

Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

Beringia / North America

Modern Distribution

The populations where mtDNA haplogroup A2M is found include:

  1. Indigenous peoples of North America (including First Nations and Native Alaskan groups)
  2. Indigenous peoples of Central America and Mesoamerica
  3. Indigenous peoples of South America (regional occurrences possible in Andean and Amazonian populations)
  4. Small, regionally isolated communities descended from Holocene Native American populations
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~6k years ago

Haplogroup A2M

Your mtDNA haplogroup emerged in Beringia / North America

Beringia / North America
~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup A2M

Cultural Heritage

These ancient cultures have been linked to haplogroup A2M based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Arroyo Seco Colonial Maya Laguna Chica Lapa do Santo Lauricocha Culture Maya Classic Santa Rosa Island Culture
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

2 direct carriers of haplogroup A2M

2 / 2 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual YCH010 from Mexico, dated 899 CE - 1030 CE
YCH010
Mexico Maya Lowland Classic 899 CE - 1030 CE Maya Classic A2m Direct
Portrait of ancient individual I10863 from Mexico, dated 1540 CE - 1680 CE
I10863
Mexico Colonial Maya Mexico 1540 CE - 1680 CE Colonial Maya A2m Direct
Chapter VI

Carrier Distribution Map

Geographic distribution of 2 ancient DNA samples (direct and subclade carriers of A2M)

Direct carrier
Time Period Filter
All Time Periods
Showing all samples
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution by country of origin (direct and subclade carriers shown by default)

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods (direct and subclade carriers shown by default)

Data

Data & Provenance

Source information and data quality

Last Updated 2026-06-14
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.