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mtDNA Haplogroup • Maternal Lineage

B5A2A1B

mtDNA Haplogroup B5A2A1B

~4,000 years ago
Coastal East / Southeast Asia
0 subclades
2 ancient samples
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Chapter I

The Story

The journey of mtDNA haplogroup B5A2A1B

Origins and Evolution

mtDNA haplogroup B5A2A1B is a downstream branch of B5A2A1 (itself part of the broader B5a2a lineage). Phylogenetically this clade represents a relatively recent split within the B5a radiation, with molecular-clock and phylogeographic evidence pointing to a mid‑Holocene origin (around 4 kya) in coastal East to Southeast Asia. The timing and coastal distribution pattern are consistent with post‑glacial population structure followed by increased maritime mobility in the Holocene.

Population genetics studies of B5a subclades show strong coastal and island associations for several derived lineages; B5A2A1B fits this pattern and likely emerged as small coastal or island populations differentiated as a result of local founder events and subsequent short‑range dispersals.

Subclades (if applicable)

As a terminal or near‑terminal branch of B5A2A1, B5A2A1B may itself contain very limited internal diversity or a small number of downstream mutations observed in few modern or ancient samples. Given the reported identification in two ancient DNA samples (low but notable archaeological presence), substructure is expected to be shallow — consistent with a recent Holocene origin and serial founder events during maritime expansions. Continued whole‑mitogenome sampling in Island Southeast Asia and Near Oceania may reveal further micro‑subclades.

Geographical Distribution

The geographic footprint of B5A2A1B centers on coastal East and Southeast Asia and extends into island Southeast Asia through Austronesian‑associated dispersals. Modern occurrences are most common in insular and coastal communities (Taiwan, the northern Philippines, parts of Indonesia and maritime Borneo/Sulawesi), present at lower frequencies in some mainland East Asian populations (Han Chinese and neighboring groups), and rarely observed in Near Oceania, likely reflecting later contact or limited Paleohistoric movement.

Phylogeographic inference suggests the lineage was carried by small maritime groups during the mid‑ to late Holocene, leading to patchy but regionally consistent occurrences aligned with trade, migration, and the spread of Austronesian languages.

Historical and Cultural Significance

Because of its timing and coastal distribution, B5A2A1B is most plausibly linked to Austronesian‑era maritime dispersals and associated coastal adaptations. It may appear in communities that participated in long‑distance voyaging, inter‑island trade, and island colonization. The haplogroup’s presence in Indigenous Taiwanese groups and some Island Southeast Asian populations aligns with models in which Taiwan and nearby islands were important staging points for subsequent movements into the Philippines, eastern Indonesia, and parts of Near Oceania.

Although not a defining marker of any single archaeological culture, B5A2A1B is compatible with dispersal pulses like the early Austronesian expansion and later Lapita‑related interactions in Near Oceania. The low number of ancient occurrences indicates the lineage was present in some Holocene archaeological contexts but was not necessarily ubiquitous.

Conclusion

B5A2A1B is a recent coastal/island mtDNA lineage derived from B5a2a that reflects mid‑Holocene demographic processes in East and Southeast Asia, particularly maritime mobility and Austronesian‑linked dispersals. Its patchy distribution and low-to-moderate frequency underscore the importance of founder effects, localized drift, and targeted sampling (especially whole mitogenome data) to fully resolve its phylogeography and internal structure.

Key Points

  • Origins and Evolution
  • Subclades (if applicable)
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 B5A2A1B Current ~4,000 years ago 🔶 Bronze Age 4,000 years 0 1 2
2 B5A2A1 ~4,000 years ago 🔶 Bronze Age 4,000 years 2 4 0
3 B5A2A ~6,000 years ago 🪨 Chalcolithic 6,000 years 1 4 0
4 B5A2 ~9,000 years ago 🌾 Neolithic 9,000 years 1 4 0
5 B5A ~12,000 years ago 🌾 Neolithic 12,000 years 2 47 0
6 B5 ~18,000 years ago 🏹 Mesolithic 18,000 years 2 81 2
7 B ~50,000 years ago 🦴 Paleolithic 50,000 years 4 1,196 75

Subclades (0)

Terminal branch - no known subclades

Siblings (1)

Other branches from the same parent haplogroup

Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

Coastal East / Southeast Asia

Modern Distribution

The populations where mtDNA haplogroup B5A2A1B is found include:

  1. Han Chinese and other East Asian populations (China, Korea, Japan)
  2. Southeast Asian groups (Vietnamese, Thai, Burmese, Malay peoples, some Filipino groups)
  3. Indigenous Taiwanese (Austronesian‑speaking groups)
  4. Austronesian‑speaking Pacific Islanders (selected Micronesian and Polynesian groups via maritime dispersals)
  5. Island Southeast Asian populations (Borneo, Sulawesi, Lesser Sunda islands)
  6. Coastal and riverine communities involved in Holocene maritime and coastal dispersals
  7. Mainland hunter–gatherer and early farming populations in parts of Indochina (low frequency)
  8. Low‑frequency occurrences in parts of Near Oceania tied to later contact or limited dispersal
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~4k years ago

Haplogroup B5A2A1B

Your mtDNA haplogroup emerged in Coastal East / Southeast Asia

Coastal East / Southeast Asia
~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup B5A2A1B

Cultural Heritage

These ancient cultures have been linked to haplogroup B5A2A1B based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Chinese Paleolithic Kofun Mesolithic British Slab Grave Culture Taiwanese Iron Thai Bronze Age Thai Iron Age Tianyuan Culture Vietnamese Neolithic Xiongnu
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

2 direct carriers of haplogroup B5A2A1B

2 / 2 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual EME002 from Mongolia, dated 200 BCE - 100 CE
EME002
Mongolia The Xiongnu People 200 BCE - 100 CE Xiongnu B5a2a1b Direct
Portrait of ancient individual JpIw32 from Japan, dated 541 CE - 603 CE
JpIw32
Japan Kofun Period Japan 541 CE - 603 CE Kofun B5a2a1b Direct
Chapter VI

Carrier Distribution Map

Geographic distribution of 2 ancient DNA samples (direct and subclade carriers of B5A2A1B)

Direct carrier
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Showing all samples
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution by country of origin (direct and subclade carriers shown by default)

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods (direct and subclade carriers shown by default)

Data

Data & Provenance

Source information and data quality

Last Updated 2026-02-16
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.