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mtDNA Haplogroup • Maternal Lineage

B5B2A

mtDNA Haplogroup B5B2A

~10,000 years ago
East and Southeast Asia
1 subclades
4 ancient samples
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Chapter I

The Story

The journey of mtDNA haplogroup B5B2A

Origins and Evolution

mtDNA haplogroup B5B2A is a downstream branch of B5B2, itself part of the broader B5/B section of mitochondrial haplogroup B. Based on its phylogenetic position and mutation accumulation relative to B5B2, B5B2A probably diversified in East–Southeast Asia during the early Holocene (around 10 kya). This time depth is consistent with post-glacial demographic expansions, coastal resource exploitation, and the beginning of Neolithic and pre-Neolithic population structure changes in mainland and island Southeast Asia.

Molecular-clock estimates for mtDNA B lineages place many subclades' origins in the Late Pleistocene to Early Holocene; B5B2A fits within the early Holocene window, consistent with a population that expanded along coastal and riverine corridors and subsequently participated in localized and long-range maritime movements.

Subclades (if applicable)

As a named subclade (B5B2A) of B5B2, the internal diversity recorded so far appears limited in published datasets and in the user's database (two ancient occurrences reported). This suggests either a relatively narrow founder expansion for the named branch or undersampling of modern and ancient populations. Additional sequencing and full mitogenome resolution would be required to resolve further downstream substructure and to identify any geographically restricted subbranches.

Geographical Distribution

B5B2A is concentrated in East and Southeast Asia with spillover into island Southeast Asia and some occurrences in Near Oceania tied to Holocene maritime contacts. Modern and ancient sample records indicate presence among:

  • Han and other East Asian groups (China, Korea, Japan) at low-to-moderate frequencies in some regions;
  • Multiple mainland Southeast Asian populations (Vietnamese, Thai, Burmese) and Malay groups;
  • Indigenous Taiwanese and several Austronesian-speaking communities in Island Southeast Asia; and
  • Low-frequency occurrences in parts of Near Oceania and selected Pacific island populations, likely reflecting later-stage maritime dispersals.

The pattern of distribution is consistent with a lineage that spread locally within mainland East–Southeast Asia and was later carried into island regions by maritime movements, including those connected to the Austronesian expansion and other Holocene coastal dispersals.

Historical and Cultural Significance

Although not as widely discussed as some Austronesian-associated mtDNA markers (for example B4a1a), B5B2A contributes to the maternal genetic signature of populations involved in East–Southeast Asian coastal and island prehistory. Its presence in Indigenous Taiwanese and some Island Southeast Asian and Pacific communities ties it to the demographic processes that accompanied seafaring, trade, and the spread of languages and cultures in the Holocene.

The haplogroup's archaeological visibility (two aDNA samples reported in the available database) confirms it existed in past populations and can help trace population continuity or movement when combined with other mtDNA and autosomal evidence. In cultural terms, B5B2A likely reflects maternal lineages of coastal foragers, early farmers, and later maritime-expanding groups rather than being diagnostic of a single archaeological culture.

Conclusion

mtDNA B5B2A is a regionally informative maternal lineage that likely arose in East–Southeast Asia around the early Holocene and subsequently participated in both local expansions and maritime dispersals into island regions. Current data point to a distribution concentrated in East and Southeast Asia with low-frequency extensions into Near Oceania; however, limited sampling and sparse ancient occurrences mean its full diversity and prehistoric dynamics will become clearer as more complete mitogenomes and ancient samples are analyzed.

Key Points

  • Origins and Evolution
  • Subclades (if applicable)
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 B5B2A Current ~10,000 years ago 🌾 Neolithic 10,000 years 1 0 4
2 B5B2 ~12,000 years ago 🌾 Neolithic 12,000 years 1 3 0
3 B5B ~12,000 years ago 🌾 Neolithic 12,000 years 3 27 6
4 B5 ~18,000 years ago 🏹 Mesolithic 18,000 years 2 81 2
5 B ~50,000 years ago 🦴 Paleolithic 50,000 years 4 1,196 75
Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

East and Southeast Asia

Modern Distribution

The populations where mtDNA haplogroup B5B2A is found include:

  1. Han Chinese and other East Asian populations (China, Korea, Japan)
  2. Southeast Asian groups (Vietnamese, Thai, Burmese, Malay peoples, some Filipino groups)
  3. Indigenous Taiwanese (Austronesian-speaking groups)
  4. Austronesian-speaking Pacific Islanders (selected Polynesians and Micronesians via maritime dispersals)
  5. Island Southeast Asian populations (Borneo, Sulawesi, Lesser Sunda islands)
  6. Coastal and riverine communities involved in Holocene maritime and coastal dispersals
  7. Mainland hunter–gatherer and early farming populations in parts of Indochina
  8. Low-frequency occurrences in parts of Near Oceania tied to later contact
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~10k years ago

Haplogroup B5B2A

Your mtDNA haplogroup emerged in East and Southeast Asia

East and Southeast Asia
~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup B5B2A

Cultural Heritage

These ancient cultures have been linked to haplogroup B5B2A based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Coastal Neolithic Early Medieval Mongolian Kazakh Iron Age Khovsgol Culture Magyar Commoner Culture Mesolithic British Red Slipped Culture Slab Grave Culture West Liao River Culture Xiongnu Xiongnu-Xianbei
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

2 direct carriers and 2 subclade carriers of haplogroup B5B2A

4 / 4 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual BRE003 from Kazakhstan, dated 400 BCE - 100 CE
BRE003
Kazakhstan Iron Age Kazakhstan 400 BCE - 100 CE Kazakh Iron Age B5b2a Direct
Portrait of ancient individual OLN011 from Mongolia, dated 700 CE - 1050 CE
OLN011
Mongolia Early Medieval Mongolia 700 CE - 1050 CE Early Medieval Mongolian B5b2a Direct
Portrait of ancient individual BRE009 from Kazakhstan, dated 35 BCE - 125 CE
BRE009
Kazakhstan Iron Age Kazakhstan 35 BCE - 125 CE Kazakh Iron Age B5b2a2 Downstream
Portrait of ancient individual TUK002 from Mongolia, dated 150 BCE - 450 CE
TUK002
Mongolia Early Medieval Xiongnu 150 BCE - 450 CE Xiongnu B5b2a2 Downstream
Chapter VI

Carrier Distribution Map

Geographic distribution of 4 ancient DNA samples (direct and subclade carriers of B5B2A)

Direct carrier Subclade carrier
Time Period Filter
All Time Periods
Showing all samples
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution by country of origin (direct and subclade carriers shown by default)

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods (direct and subclade carriers shown by default)

Data

Data & Provenance

Source information and data quality

Last Updated 2026-02-16
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.