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mtDNA Haplogroup • Maternal Lineage

U2E1

mtDNA Haplogroup U2E1

~12,000 years ago
Western Eurasia
6 subclades
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Chapter I

The Story

The journey of mtDNA haplogroup U2E1

Origins and Evolution

Haplogroup U2E1 sits as a downstream branch of the U2E/U2EA portion of the mtDNA tree. The broader U2 haplogroup arose early in Upper Paleolithic Eurasia, and its descendant lineages show deep structure across South Asia and Europe. U2E1 is best understood as a post-glacial / Mesolithic-era diversification within the U2E radiation in western or central Eurasia, likely coalescing in the late Pleistocene to early Holocene (on the order of ~10–15 kya). Because U2E1 is an intermediate and relatively rare clade, its exact origin point and age estimates remain imprecise and would benefit from additional complete mitogenomes and dense ancient DNA sampling.

Subclades

As an intermediate clade under U2EA, U2E1 may contain further downstream sub-branches in full-resolution phylogenies, but many of these are currently poorly characterized in public databases. Where high-resolution mitogenomes are available, U2E1 often functions as a connecting node between the parent U2EA cluster and more localized descendant lineages; ongoing sequencing efforts occasionally reveal novel private mutations and very localized subclades within modern and ancient samples.

Geographical Distribution

The distribution of U2E1 is concentrated in western and parts of central Eurasia in both ancient and modern contexts, but at generally low frequencies. Ancient DNA from Mesolithic and early Neolithic Europe includes U2-type lineages, and U2E1 specifically has been observed in limited ancient samples and sporadically in modern populations of Western Europe. Low-frequency occurrences have also been reported in peripheral regions (Northern and Eastern Europe) and—as rare traces—near the Near East and South Asia, plausibly reflecting ancient population contacts and later movements.

Historical and Cultural Significance

Because U2E1 connects to lineages common among prehistoric European hunter-gatherers, it is often interpreted as part of the maternal substrate present in Europe before and during the early spread of farming. It therefore has relevance for studies of Mesolithic population structure, hunter-gatherer persistence, and the maternal contributions to subsequent Neolithic and Bronze Age communities. U2E1 itself is not diagnostic of a single archaeological culture but appears as one of several maternal lineages that persisted through transitions such as the Mesolithic-to-Neolithic shift and into later prehistoric periods.

Conclusion

U2E1 is a low-frequency, regionally informative maternal lineage within the U2 family that likely originated in western/central Eurasia around the Mesolithic. It functions as an intermediate and under-characterized clade that links parent U2EA to more localized descendant lineages. Greater sampling of complete mitogenomes—especially from ancient remains and understudied modern populations—will improve age estimates, refine its subclade structure, and clarify its historical dynamics.

Key Points

  • Origins and Evolution
  • Subclades
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 U2E1 Current ~12,000 years ago 🌾 Neolithic 12,000 years 6 99 0
2 U2EA 3 142 0
3 U2E ~18,000 years ago 🏹 Mesolithic 18,000 years 1 194 45
4 U2A ~22,000 years ago 🏹 Mesolithic 22,000 years 4 689 6
5 U2 ~45,000 years ago 🦴 Paleolithic 45,000 years 3 758 37
6 U2'3'4'7'8'9 5 2,860 0
7 U ~46,000 years ago 🦴 Paleolithic 46,000 years 5 4,314 110
8 R ~55,000 years ago 🦴 Paleolithic 55,000 years 17 17,854 57
9 NA 1 17,854 0
10 N ~60,000 years ago 🦴 Paleolithic 60,000 years 16 20,371 13
11 L3 ~70,000 years ago 🦴 Paleolithic 70,000 years 7 23,542 6
12 L3'4 2 23,581 0
13 L3'4'6 2 23,584 0
14 L2'3'4'6 2 24,475 0
15 L2'3'4'5'6'7 2 24,488 0
16 L1'2'3'4'5'6'7 2 24,903 0
17 L ~160,000 years ago 🦴 Paleolithic 160,000 years 2 25,205 5

Siblings (2)

Other branches from the same parent haplogroup

Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

Western Eurasia

Modern Distribution

The populations where mtDNA haplogroup U2E1 is found include:

  1. Mesolithic and early Neolithic European hunter-gatherer remains (ancient DNA datasets)
  2. Modern Western European populations (e.g., Iberia, France) at low to moderate rarity
  3. British Isles and Northern Europe (sporadic low-frequency occurrences)
  4. Eastern Europe and the Baltic region (occasional detections in modern and ancient samples)
  5. Near East and South Asia (rare, possibly reflecting ancient gene flow or recent low-frequency presence)
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~12k years ago

Haplogroup U2E1

Your mtDNA haplogroup emerged in Western Eurasia

Western Eurasia
~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup U2E1

Cultural Heritage

These ancient cultures have been linked to haplogroup U2E1 based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Baltic Hunter-Gatherer Comb Ceramic Culture Dnieper Mesolithic Motala Culture Ob River Ukrainian Neolithic Yuzhny Oleny Ostrov
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

14 direct carriers and 86 subclade carriers of haplogroup U2E1

50 / 50 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual BUR002 from Mongolia, dated 150 BCE - 450 CE
BUR002
Mongolia Early Medieval Xiongnu 150 BCE - 450 CE Xiongnu U2e1 Direct
Portrait of ancient individual I17322 from Czech Republic, dated 400 BCE - 200 BCE
I17322
Czech Republic Iron Age La Tène Culture, Czech Republic 400 BCE - 200 BCE La Tène Culture U2e1 Direct
Portrait of ancient individual SH-12 from Hungary, dated 900 CE - 1000 CE
SH-12
Hungary Conqueror Commoner Hungary 900 CE - 1000 CE Magyar Commoner Culture U2e1 Direct
Portrait of ancient individual CGG100750 from Denmark, dated 1000 CE - 1300 CE
CGG100750
Denmark Medieval Danish 1000 CE - 1300 CE Danish Medieval U2e1 Direct
Portrait of ancient individual I6363 from Mongolia, dated 1215 BCE - 1055 BCE
I6363
Mongolia Late Bronze Age Mongun-Taiga 3, Mongolia 1215 BCE - 1055 BCE Mongun-Taiga Culture U2e1 Direct
Portrait of ancient individual RISE512 from Russia, dated 1488 BCE - 1295 BCE
RISE512
Russia Andronovo Culture, Russia 1488 BCE - 1295 BCE Andronovo Culture U2e1 Direct
Portrait of ancient individual RISE512 from Russia, dated 1488 BCE - 1295 BCE
RISE512
Russia The Ancient Eurasian Steppe 1488 BCE - 1295 BCE U2e1 Direct
Portrait of ancient individual NEO899 from Kazakhstan, dated 2192 BCE - 1985 BCE
NEO899
Kazakhstan Middle-Late Bronze Age Elunino Culture 2192 BCE - 1985 BCE Elunino U2e1 Direct
Portrait of ancient individual I0419 from Russia, dated 2200 BCE - 1900 BCE
I0419
Russia Potapovka Culture 2200 BCE - 1900 BCE Potapovka Culture U2e1 Direct
Portrait of ancient individual NEO900 from Kazakhstan, dated 2404 BCE - 2155 BCE
NEO900
Kazakhstan Middle-Late Bronze Age Elunino Culture 2404 BCE - 2155 BCE Elunino U2e1 Direct
Chapter VI

Carrier Distribution Map

Geographic distribution of 100 ancient DNA samples (direct and subclade carriers of U2E1)

Direct carrier Subclade carrier
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Showing all samples
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution by country of origin (direct and subclade carriers shown by default)

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods (direct and subclade carriers shown by default)

Data

Data & Provenance

Source information and data quality

Last Updated 2026-06-14
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.